RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TRAV19A0A0A6YYK7 116 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 SLC12A8A0AV02 714 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 SLC35F4A4IF30 521 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 I6L893 689 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 LATS1O95835 1130 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 L1CAMP32004 1257 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 HTR7P34969 479 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 SSR1P43307 286 aaKnown RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 HCAR3P49019 387 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 HARS2P49590 506 aaKnown RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 AMPD2Q01433 879 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 DLX2Q07687 328 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 SLC5A9Q2M3M2 681 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ATP13A4Q4VNC1 1196 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 RAB6CQ53S08 254 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ZC3H12AQ5D1E8 599 aaKnown RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 KCNT1Q5JUK3 1230 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 RARS2Q5T160 578 aaKnown RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 DAB2IPQ5VWQ8 1189 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 TXNRD3NBQ6F5E7 133 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 Q7L0L9 218 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ARL14EPQ8N8R7 260 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 MAB21L3Q8N8X9 362 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 PLD4Q96BZ4 506 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 TCEAL4Q96EI5 215 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 RBM41Q96IZ5 413 aaKnown RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 BTN2A3PQ96KV6 586 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 NECTIN4Q96NY8 510 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 SLC22A12Q96S37 553 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 PEBP4Q96S96 227 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 CYP2S1Q96SQ9 504 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 DCLK3Q9C098 648 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 NACA2Q9H009 215 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 TKTL2Q9H0I9 626 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 RAB6CQ9H0N0 254 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 NPHS2Q9NP85 383 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 C11orf16Q9NQ32 467 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 MTMR10Q9NXD2 777 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 RASAL2Q9UJF2 1139 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 DYRK1BQ9Y463 629 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ZFP37Q9Y6Q3 630 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 ATG2AQ2TAZ0 1938 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 C3orf70A6NLC5 250 aaPredicted RBP8.28□□□□□ -1.08
COPS3-215ENST00000578317 KCNK3O14649 394 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 GREM1O60565 184 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 TBX10O75333 385 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 STC2O76061 302 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 CKMP06732 381 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 THBS1P07996 1170 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 PYGMP11217 842 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 KDELR1P24390 212 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 IL4RP24394 825 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 PTPN7P35236 360 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 AVPR1AP37288 418 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 CETN2P41208 172 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 MTHFRP42898 656 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 NTHL1P78549 312 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 ZXDBP98169 803 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 CYP4F8P98187 520 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 SEMA3BQ13214 749 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 TEAD2Q15562 447 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 CLUL1Q15846 466 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 PPP2R5EQ16537 467 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 EFHC2Q5JST6 749 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 GPR158Q5T848 1215 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 HTR3DQ70Z44 454 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 DDX42Q86XP3 938 aaKnown RBP eCLIP8.28□□□□□ -1.08
COPS3-215ENST00000578317 MIB1Q86YT6 1006 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 RASGEF1CQ8N431 466 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 CCDC185Q8N715 623 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 ATP6V0D2Q8N8Y2 350 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 KCTD6Q8NC69 237 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 SMRP1Q8NCR6 262 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 ITFG1Q8TB96 612 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 RAPGEF5Q92565 580 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 RIPOR3Q96MK2 946 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 OSBPL9Q96SU4 736 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 SNRNP25Q9BV90 132 aaKnown RBP8.28□□□□□ -1.08
COPS3-215ENST00000578317 RETREG1Q9H6L5 497 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 ZWILCHQ9H900 591 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 TRPV4Q9HBA0 871 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 ANLNQ9NQW6 1124 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 GKN1Q9NS71 199 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 TDP1Q9NUW8 608 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 CLDND1Q9NY35 253 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 PACSIN2Q9UNF0 486 aaPredicted RBP8.28□□□□□ -1.08
COPS3-215ENST00000578317 ZNF510Q9Y2H8 683 aa8.28□□□□□ -1.08
COPS3-215ENST00000578317 PRRC2BQ5JSZ5 2229 aaKnown RBP8.27□□□□□ -1.09
COPS3-215ENST00000578317 SYNJ2BP-COX16A0A087WUM0 186 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 MSI1O43347 362 aaKnown RBP8.27□□□□□ -1.09
COPS3-215ENST00000578317 APOEP02649 317 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 KLKB1P03952 638 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 MBL2P11226 248 aaPredicted RBP8.27□□□□□ -1.09
COPS3-215ENST00000578317 GJA1P17302 382 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 MARCKSL1P49006 195 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 SLC11A2P49281 568 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 KCNQ1P51787 676 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 SMTNL2Q2TAL5 461 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 C5orf22Q49AR2 442 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms