RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 POLR2EP19388 210 aaKnown RBP19.92■□□□□ 0.78
SS18-208ENST00000577751 OGDHQ02218 1023 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 NRG1Q02297 640 aaPredicted RBP19.92■□□□□ 0.78
SS18-208ENST00000577751 TBX2Q13207 712 aaPredicted RBP19.92■□□□□ 0.78
SS18-208ENST00000577751 ARL13BQ3SXY8 428 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 CYB5D2Q8WUJ1 264 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 NTAN1Q96AB6 310 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 TRIM11Q96F44 468 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 TMEM245Q9H330 911 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 CNOT8Q9UFF9 292 aaKnown RBP19.92■□□□□ 0.78
SS18-208ENST00000577751 NENFQ9UMX5 172 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 PLA2G4CQ9UP65 541 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 TBC1D30Q9Y2I9 924 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 RAD54BQ9Y620 910 aa19.92■□□□□ 0.78
SS18-208ENST00000577751 E9PAM4 449 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 RPP40O75818 363 aaKnown RBP19.91■□□□□ 0.78
SS18-208ENST00000577751 CNTN5O94779 1100 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 GABRG2P18507 467 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 CSKP41240 450 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 CDH4P55283 916 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 OXCT1P55809 520 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 SIM2Q14190 667 aaPredicted RBP19.91■□□□□ 0.78
SS18-208ENST00000577751 PLEKHG6Q3KR16 790 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 ALFQ53S48 1182 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 PITRM1Q5JRX3 1037 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 LRRC31Q6UY01 552 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 APCDD1Q8J025 514 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 ALG14Q96F25 216 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 MYO19Q96H55 970 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 TPSD1Q9BZJ3 242 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 TRIM5Q9C035 493 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 OSBPL2Q9H1P3 480 aa19.91■□□□□ 0.78
SS18-208ENST00000577751 SMG5Q9UPR3 1016 aaKnown RBP19.91■□□□□ 0.78
SS18-208ENST00000577751 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.9■□□□□ 0.78
SS18-208ENST00000577751 MFAP3LO75121 409 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 ASLP04424 464 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 PRKCHP24723 683 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 SCAPQ12770 1279 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 ZNF177Q13360 481 aaPredicted RBP19.9■□□□□ 0.78
SS18-208ENST00000577751 ASTE1Q2TB18 679 aaPredicted RBP19.9■□□□□ 0.78
SS18-208ENST00000577751 MANEALQ5VSG8 457 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 ALKBH5Q6P6C2 394 aaKnown RBP19.9■□□□□ 0.78
SS18-208ENST00000577751 SERPINA13PQ6UXR4 307 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 CCDC185Q8N715 623 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 OR52K2Q8NGK3 314 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 FNIP1Q8TF40 1166 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 HMGB4Q8WW32 186 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 ZNF653Q96CK0 615 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 MRGPRX3Q96LB0 322 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 ABHD10Q9NUJ1 306 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 PPARGC1AQ9UBK2 798 aaKnown RBP19.9■□□□□ 0.78
SS18-208ENST00000577751 OR12D3Q9UGF7 316 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 OR51B4Q9Y5P0 310 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 SCINQ9Y6U3 715 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 PLXND1Q9Y4D7 1925 aa19.9■□□□□ 0.78
SS18-208ENST00000577751 SSU72P8A0A1W2PR75 194 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 MOCS3O95396 460 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 TPM1P09493 284 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 MZF1P28698 734 aaPredicted RBP19.89■□□□□ 0.77
SS18-208ENST00000577751 EIF4A3P38919 411 aaKnown RBP19.89■□□□□ 0.77
SS18-208ENST00000577751 ZNF252P-AS1Q0IIN9 211 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 MAPK8IP2Q13387 824 aaPredicted RBP19.89■□□□□ 0.77
SS18-208ENST00000577751 STARD3Q14849 445 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 USP39Q53GS9 565 aaKnown RBP19.89■□□□□ 0.77
SS18-208ENST00000577751 TMC6Q7Z403 805 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 KDM1BQ8NB78 822 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 ZC3H10Q96K80 434 aaKnown RBP19.89■□□□□ 0.77
SS18-208ENST00000577751 PPP1R9BQ96SB3 815 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 FEM1AQ9BSK4 669 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 MAGEB5Q9BZ81 275 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 MRPL47Q9HD33 250 aaKnown RBP19.89■□□□□ 0.77
SS18-208ENST00000577751 MPP6Q9NZW5 540 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 ZNF212Q9UDV6 495 aa19.89■□□□□ 0.77
SS18-208ENST00000577751 SRGAP2O75044 1071 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 SRPRAP08240 638 aaKnown RBP19.88■□□□□ 0.77
SS18-208ENST00000577751 C7P10643 843 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 NDUFV2P19404 249 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 AIF1P55008 147 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 ADKP55263 362 aaKnown RBP19.88■□□□□ 0.77
SS18-208ENST00000577751 CAMK2GQ13555 558 aaPredicted RBP19.88■□□□□ 0.77
SS18-208ENST00000577751 FNDC3BQ53EP0 1204 aaKnown RBP19.88■□□□□ 0.77
SS18-208ENST00000577751 SLFN11Q7Z7L1 901 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 MRGPRX1Q96LB2 322 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 TRIM7Q9C029 511 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 ZYG11BQ9C0D3 744 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 THAP2Q9H0W7 228 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 BCCIPQ9P287 314 aaKnown RBP eCLIP19.88■□□□□ 0.77
SS18-208ENST00000577751 MYO1AQ9UBC5 1043 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 ERVW-1Q9UQF0 538 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 SPAG17Q6Q759 2223 aa19.88■□□□□ 0.77
SS18-208ENST00000577751 ZFHX2Q9C0A1 2572 aaPredicted RBP19.88■□□□□ 0.77
SS18-208ENST00000577751 FAM72CH0Y354 149 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 DCLK1O15075 740 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 EPHX1P07099 455 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 HLA-EP13747 358 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 PSMA2P25787 234 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 P2RY2P41231 377 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 CTSOP43234 321 aaPredicted RBP19.87■□□□□ 0.77
SS18-208ENST00000577751 COPAP53621 1224 aa19.87■□□□□ 0.77
SS18-208ENST00000577751 ECT2LQ008S8 904 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms