RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 ADPRHP54922 357 aa5.88□□□□□ -1.47
NUP88-213ENST00000576862 PDCD2Q16342 344 aaPredicted RBP5.88□□□□□ -1.47
NUP88-213ENST00000576862 DGAT2L7PQ6IED9 249 aa5.88□□□□□ -1.47
NUP88-213ENST00000576862 TRAPPC12Q8WVT3 735 aa5.88□□□□□ -1.47
NUP88-213ENST00000576862 KAT2AQ92830 837 aa5.88□□□□□ -1.47
NUP88-213ENST00000576862 MSI2Q96DH6 328 aaKnown RBP5.88□□□□□ -1.47
NUP88-213ENST00000576862 LTV1Q96GA3 475 aaPredicted RBP5.88□□□□□ -1.47
NUP88-213ENST00000576862 IPO11Q9UI26 975 aaKnown RBP5.88□□□□□ -1.47
NUP88-213ENST00000576862 AGO2Q9UKV8 859 aaKnown RBP5.88□□□□□ -1.47
NUP88-213ENST00000576862 ZNF814B7Z6K7 855 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 FAM155BO75949 473 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 PTGER1P34995 402 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 GRK6P43250 576 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 GRAMD1BQ3KR37 738 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 MRPL10Q7Z7H8 261 aaKnown RBP5.87□□□□□ -1.47
NUP88-213ENST00000576862 GALNT15Q8N3T1 639 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 NKAPQ8N5F7 415 aaKnown RBP5.87□□□□□ -1.47
NUP88-213ENST00000576862 ZNF548Q8NEK5 533 aaPredicted RBP5.87□□□□□ -1.47
NUP88-213ENST00000576862 CSGALNACT1Q8TDX6 532 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 IP6K1Q92551 441 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 ADAD1Q96M93 576 aaKnown RBP5.87□□□□□ -1.47
NUP88-213ENST00000576862 TUBB6Q9BUF5 446 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 CHMP4AQ9BY43 222 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 TAF1DQ9H5J8 278 aaPredicted RBP5.87□□□□□ -1.47
NUP88-213ENST00000576862 MSRB1Q9NZV6 116 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 UTS2RQ9UKP6 389 aa5.87□□□□□ -1.47
NUP88-213ENST00000576862 KIR2DS5A0A0G2JLQ3 304 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 A0A1W2PPC1 479 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 MCIDASD6RGH6 385 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 KIR2DS3K7RE56 304 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 GRM8O00222 908 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 SOCS2O14508 198 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 FGF2P09038 288 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 PRPH2P23942 346 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 LMO1P25800 156 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 SMAD1Q15797 465 aaKnown RBP5.86□□□□□ -1.47
NUP88-213ENST00000576862 LRRC24Q50LG9 513 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 ASPHD1Q5U4P2 390 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 TTLL5Q6EMB2 1281 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 SUGP1Q8IWZ8 645 aaKnown RBP5.86□□□□□ -1.47
NUP88-213ENST00000576862 OR6Y1Q8NGX8 325 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 EME1Q96AY2 570 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 TRMOQ9BU70 441 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 HDHD5Q9BXW7 423 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 PDE11AQ9HCR9 933 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 G6PC2Q9NQR9 355 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 SLC22A11Q9NSA0 550 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 FBXO4Q9UKT5 387 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 PKP3Q9Y446 797 aa5.86□□□□□ -1.47
NUP88-213ENST00000576862 KCNJ18B7U540 433 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 E7EVH7 732 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 ATG13O75143 517 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 ZBTB16Q05516 673 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 CDK18Q07002 472 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 PDCLQ13371 301 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 CUL4BQ13620 913 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 PRKG1Q13976 671 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 ANO1Q5XXA6 986 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 LRIG3Q6UXM1 1119 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 SYT13Q7L8C5 426 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 IRF2BP2Q7Z5L9 587 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 DDIASQ8IXT1 998 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 ARFGAP1Q8N6T3 406 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 SLC44A5Q8NCS7 719 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 FAM110DQ8TAY7 271 aaPredicted RBP5.85□□□□□ -1.47
NUP88-213ENST00000576862 ARRDC3Q96B67 414 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 FCRL4Q96PJ5 515 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 PAGR1Q9BTK6 254 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 SAYSD1Q9NPB0 183 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 THSD1Q9NS62 852 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 ZBTB40Q9NUA8 1239 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 LAMP3Q9UQV4 416 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 DTX4Q9Y2E6 619 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 HS3ST3B1Q9Y662 390 aa5.85□□□□□ -1.47
NUP88-213ENST00000576862 ZNF335Q9H4Z2 1342 aaPredicted RBP5.84□□□□□ -1.47
NUP88-213ENST00000576862 CXorf65A6NEN9 183 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 IFRD1O00458 451 aaPredicted RBP5.84□□□□□ -1.47
NUP88-213ENST00000576862 PRPF4O43172 522 aaKnown RBP eCLIP5.84□□□□□ -1.47
NUP88-213ENST00000576862 PIP5K1CO60331 668 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 LYL1P12980 280 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 CHN1P15882 459 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 TNFRSF1BP20333 461 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 ADD2P35612 726 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 PCP4P48539 62 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 SEMA3AQ14563 771 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 SMTNL2Q2TAL5 461 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 ARL13AQ5H913 290 aaPredicted RBP5.84□□□□□ -1.47
NUP88-213ENST00000576862 PIK3CD-AS1Q5SR53 167 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 C10orf76Q5T2E6 689 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 ISM2Q6H9L7 571 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 SYNE3Q6ZMZ3 975 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 RINLQ6ZS11 566 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 RASGRP2Q7LDG7 609 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 TMEM200AQ86VY9 491 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 PTGR2Q8N8N7 351 aaPredicted RBP5.84□□□□□ -1.47
NUP88-213ENST00000576862 ENDOVQ8N8Q3 282 aaKnown RBP5.84□□□□□ -1.47
NUP88-213ENST00000576862 RILPL2Q969X0 211 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 PIGSQ96S52 555 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 FRMD8Q9BZ67 464 aaPredicted RBP5.84□□□□□ -1.47
NUP88-213ENST00000576862 TWSG1Q9GZX9 223 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms