RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	CCAR2	Q8N163	923 aa	Known RBP	11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PYROXD2	Q8N2H3	581 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ACRBP	Q8NEB7	543 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	OR52K2	Q8NGK3	314 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	USP33	Q8TEY7	942 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PDLIM2	Q96JY6	352 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	RPRD1A	Q96P16	312 aa	Predicted RBP	11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	NCAPG	Q9BPX3	1015 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	IER2	Q9BTL4	223 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	SNRNP25	Q9BV90	132 aa	Known RBP	11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	OR12D3	Q9UGF7	316 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	INTS6	Q9UL03	887 aa	Known RBP	11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	USP18	Q9UMW8	372 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	DNAH14	Q0VDD8	3507 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857	FAM186A	A6NE01	2351 aa		11.17	□□□□□ -0.62
SLC12A4-215	ENST00000575857		A0A0A6YYK5	440 aa	Predicted RBP	11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	TYW5	A2RUC4	315 aa	Known RBP	11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	TBC1D3B	A6NDS4	549 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PJA2	O43164	708 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	CLDN11	O75508	207 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	RNF8	O76064	485 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	LRIG2	O94898	1065 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PABPC1	P11940	636 aa	Known RBP	11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	DES	P17661	470 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	L1CAM	P32004	1257 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	MAN1A1	P33908	653 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	CDH4	P55283	916 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	CCZ1B	P86790	482 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	CCZ1	P86791	482 aa	Predicted RBP	11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	LMAN2	Q12907	356 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	MTAP	Q13126	283 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	GSE1	Q14687	1217 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	FUT11	Q495W5	492 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PREPL	Q4J6C6	727 aa	Predicted RBP	11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	EFHC2	Q5JST6	749 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	EMC10	Q5UCC4	262 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	TXNRD3NB	Q6F5E7	133 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ANKS1B	Q7Z6G8	1248 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ADIPOR2	Q86V24	386 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	NLRP14	Q86W24	1093 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PSTK	Q8IV42	348 aa	Known RBP	11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	LRRC8A	Q8IWT6	810 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	CARNMT1	Q8N4J0	409 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ZNF557	Q8N988	423 aa	Predicted RBP	11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	WFIKKN2	Q8TEU8	576 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ALG14	Q96F25	216 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	HINFP	Q9BQA5	517 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	LACRT	Q9GZZ8	138 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ABCB8	Q9NUT2	735 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	GPATCH2L	Q9NWQ4	482 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	C2orf42	Q9NWW7	574 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	MPP6	Q9NZW5	540 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PCSK1N	Q9UHG2	260 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	SALL4	Q9UJQ4	1053 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	GGA2	Q9UJY4	613 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	TBC1D30	Q9Y2I9	924 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	OR51B4	Q9Y5P0	310 aa		11.16	□□□□□ -0.62
SLC12A4-215	ENST00000575857	MIA3	Q5JRA6	1907 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857		A0A0U1RQJ8	604 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	BTNL10	A8MVZ5	291 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PRPSAP2	O60256	369 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	SRGAP2	O75044	1071 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	RARA	P10276	462 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	RHOQ	P17081	205 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	VAV2	P52735	878 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	PLK1	P53350	603 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	TAS2R40	P59535	323 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	MRPS21	P82921	87 aa	Known RBP	11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	CDH18	Q13634	790 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ENPP2	Q13822	863 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	EIF4H	Q15056	248 aa	Known RBP	11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ERMARD	Q5T6L9	678 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	EGFLAM	Q63HQ2	1017 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	LRRC31	Q6UY01	552 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	SPEM1	Q8N4L4	309 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	CCDC112	Q8NEF3	446 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	RPLP0P6	Q8NHW5	317 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	KCNV2	Q8TDN2	545 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ATRIP	Q8WXE1	791 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	TBC1D31	Q96DN5	1066 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	KCTD15	Q96SI1	283 aa	Predicted RBP	11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	DESI2	Q9BSY9	194 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ZYG11B	Q9C0D3	744 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ELOVL2	Q9NXB9	296 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	LCMT1	Q9UIC8	334 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	AP4E1	Q9UPM8	1137 aa		11.15	□□□□□ -0.62
SLC12A4-215	ENST00000575857	ZNF292	O60281	2723 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	WASH4P	A8MWX3	477 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857		H0Y626	953 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ARHGAP6	O43182	974 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ADAM23	O75077	832 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	PAPSS2	O95340	614 aa	Predicted RBP	11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TDGF1	P13385	188 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	MZF1	P28698	734 aa	Predicted RBP	11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TIE1	P35590	1138 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CSK	P41240	450 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ARHGAP25	P42331	645 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms