RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ARRB2P32121 409 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 ADRA1BP35368 520 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 HARS2P49590 506 aaKnown RBP9.17□□□□□ -0.94
NCBP3-204ENST00000574911 IDH3AP50213 366 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 AIF1P55008 147 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 ACTR3P61158 418 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 MRPS35P82673 323 aaKnown RBP9.17□□□□□ -0.94
NCBP3-204ENST00000574911 SEMA3BQ13214 749 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 NME3Q13232 169 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 FAM72AQ5TYM5 149 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 KIAA0319Q5VV43 1072 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 FAM72DQ6L9T8 149 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 PAXIP1Q6ZW49 1069 aaPredicted RBP9.17□□□□□ -0.94
NCBP3-204ENST00000574911 PID1Q7Z2X4 250 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 FAM72BQ86X60 149 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 OR52K1Q8NGK4 314 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 NPLOC4Q8TAT6 608 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 CLPTM1LQ96KA5 538 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 RBBP8Q99708 897 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 FAM96AQ9H5X1 160 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 LRRC40Q9H9A6 602 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 WDR6Q9NNW5 1121 aaKnown RBP9.17□□□□□ -0.94
NCBP3-204ENST00000574911 CASS4Q9NQ75 786 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 ANLNQ9NQW6 1124 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 IL1RAPL1Q9NZN1 696 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 KLHL8Q9P2G9 620 aaPredicted RBP9.17□□□□□ -0.94
NCBP3-204ENST00000574911 SLC7A8Q9UHI5 535 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 IPPQ9Y573 584 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 RPS6KL1Q9Y6S9 549 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 WASF2Q9Y6W5 498 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 UTRNP46939 3433 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 C9IYK1 514 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 NRP1O14786 923 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 DYNC1LI2O43237 492 aaPredicted RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 LINGO3P0C6S8 592 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 RALBP11234 206 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 ERCC2P18074 760 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 ACAT1P24752 427 aaKnown RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 TYK2P29597 1187 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 EPHX2P34913 555 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 HCAR3P49019 387 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 TKTL1P51854 596 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 GJA9P57773 515 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 ABCE1P61221 599 aaKnown RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 KLC1Q07866 573 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SCAPQ12770 1279 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 OLIG2Q13516 323 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 MFSD10Q14728 455 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 LBRQ14739 615 aaKnown RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 ZRSR2Q15696 482 aaKnown RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 CCDC153Q494R4 210 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 KCTD11Q693B1 232 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 IRGCQ6NXR0 463 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 TMEM135Q86UB9 458 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 DCLK2Q8N568 766 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SPDL1Q96EA4 605 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 LBHD1Q9BQE6 289 aaPredicted RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 GPAMQ9HCL2 828 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SNX15Q9NRS6 342 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 KRT82Q9NSB4 513 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 TXNDC16Q9P2K2 825 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 DNAJB4Q9UDY4 337 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 ANGPTL2Q9UKU9 493 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 GNEQ9Y223 722 aaKnown RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 APOBEC2Q9Y235 224 aaKnown RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 LRCH1Q9Y2L9 728 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 A0A088AWK7 358 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 ZCWPW2A0A1B0GU75 182 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 I6L893 689 aaPredicted RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 KCNK1O00180 336 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SKAP2O75563 359 aaPredicted RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 USP1O94782 785 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 FBXO21O94952 628 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 PDHA1P08559 390 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SKIP12755 728 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 MYL4P12829 197 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 MX2P20592 715 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SPRP35270 261 aaPredicted RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SERPINB8P50452 374 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 CDK7P50613 346 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 DAOAP59103 153 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 PPIDQ08752 370 aaKnown RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 C6orf163Q5TEZ5 329 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 WSCD1Q658N2 575 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 DPY19L2Q6NUT2 758 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 PDZD4Q76G19 769 aaPredicted RBP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 PLEKHH3Q7Z736 793 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 ANKRD23Q86SG2 305 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SLC7A14Q8TBB6 771 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 PPP4R1Q8TF05 950 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 MED10Q9BTT4 135 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 ULBP1Q9BZM6 244 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 SOX13Q9UN79 622 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 ZNF236Q9UL36 1845 aa9.16□□□□□ -0.94
NCBP3-204ENST00000574911 CCL15-CCL14A0A0B4J2E2 113 aa9.15□□□□□ -0.94
NCBP3-204ENST00000574911 DPPA5A6NC42 116 aa9.15□□□□□ -0.94
NCBP3-204ENST00000574911 EIF4E1BA6NMX2 242 aaKnown RBP9.15□□□□□ -0.94
NCBP3-204ENST00000574911 HAS3O00219 553 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms