RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PIK3R6Q5UE93 754 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 BSPRYQ5W0U4 402 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 ARHGAP17Q68EM7 881 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 PM20D1Q6GTS8 502 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 RFWD3Q6PCD5 774 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 PCSK4Q6UW60 755 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 ZC3H3Q8IXZ2 948 aaKnown RBP12.38□□□□□ -0.43
CTNS-208ENST00000574218 CARNMT1Q8N4J0 409 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 KDM1BQ8NB78 822 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 WFDC5Q8TCV5 224 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 TAS1R2Q8TE23 839 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 TTC17Q96AE7 1141 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 THSD1Q9NS62 852 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 CISHQ9NSE2 258 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
CTNS-208ENST00000574218 WNT9AO14904 365 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 MAPK13O15264 365 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 MSI1O43347 362 aaKnown RBP12.37□□□□□ -0.43
CTNS-208ENST00000574218 SIGLEC6O43699 453 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 ACSL4O60488 711 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 SDC3O75056 442 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 YEATS4O95619 227 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 MPOP05164 745 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 TRIM49P0CI25 452 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 TRIM49CP0CI26 452 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
CTNS-208ENST00000574218 ERVPABLB-1P60509 514 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 BST2Q10589 180 aaKnown RBP12.37□□□□□ -0.43
CTNS-208ENST00000574218 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
CTNS-208ENST00000574218 LY6DQ14210 128 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 PROX2Q3B8N5 592 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 IQCHQ86VS3 1027 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 SLC4A11Q8NBS3 891 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 FIBINQ8TAL6 211 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 TMEM174Q8WUU8 243 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 NDRG1Q92597 394 aaKnown RBP12.37□□□□□ -0.43
CTNS-208ENST00000574218 CCDC47Q96A33 483 aaKnown RBP12.37□□□□□ -0.43
CTNS-208ENST00000574218 FAXDC2Q96IV6 333 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 DPH1Q9BZG8 443 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 TMEM8AQ9HCN3 771 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 ERVW-1Q9UQF0 538 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 DMTF1Q9Y222 760 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 PCDHB1Q9Y5F3 818 aa12.37□□□□□ -0.43
CTNS-208ENST00000574218 GOLGA6L7A0A1B0GV03 622 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 TTC34A8MYJ7 566 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 USP12O75317 370 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 WISP1O95388 367 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 CD19P15391 556 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 NR2F2P24468 414 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 MAT2AP31153 395 aaKnown RBP12.36□□□□□ -0.43
CTNS-208ENST00000574218 DUSP3P51452 185 aaPredicted RBP12.36□□□□□ -0.43
CTNS-208ENST00000574218 RAD23BP54727 409 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 TBX4P57082 545 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 NUCB2P80303 420 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 ECT2LQ008S8 904 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 STK4Q13043 487 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 ARID5BQ14865 1188 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 SETMARQ53H47 684 aaPredicted RBP12.36□□□□□ -0.43
CTNS-208ENST00000574218 SGO2Q562F6 1265 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 PITRM1Q5JRX3 1037 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 C1orf220Q5T0J3 134 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 C9orf64Q5T6V5 341 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 KRT39Q6A163 491 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.36□□□□□ -0.43
CTNS-208ENST00000574218 TMC6Q7Z403 805 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 DSG4Q86SJ6 1040 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 FAM186BQ8IYM0 893 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 STK40Q8N2I9 435 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 AADATQ8N5Z0 425 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 KIAA0895Q8NCT3 520 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 TATDN2Q93075 761 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 CCDC97Q96F63 343 aaPredicted RBP12.36□□□□□ -0.43
CTNS-208ENST00000574218 KLHDC7BQ96G42 594 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 MYO19Q96H55 970 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 KCTD10Q9H3F6 313 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 KDM4CQ9H3R0 1056 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 TSPAN16Q9UKR8 245 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 MTMR6Q9Y217 621 aa12.36□□□□□ -0.43
CTNS-208ENST00000574218 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
CTNS-208ENST00000574218 HEMK1Q9Y5R4 338 aaPredicted RBP12.36□□□□□ -0.43
CTNS-208ENST00000574218 YJEFN3A6XGL0 299 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 E7ENQ6 273 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 FFAR2O15552 330 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 LATO43561 262 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 STX10O60499 249 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 CSO75390 466 aaKnown RBP12.35□□□□□ -0.43
CTNS-208ENST00000574218 LCP1P13796 627 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 RPL13P26373 211 aaKnown RBP12.35□□□□□ -0.43
CTNS-208ENST00000574218 MZF1P28698 734 aaPredicted RBP12.35□□□□□ -0.43
CTNS-208ENST00000574218 RBMS1P29558 406 aaKnown RBP12.35□□□□□ -0.43
CTNS-208ENST00000574218 PSMC2P35998 433 aaKnown RBP12.35□□□□□ -0.43
CTNS-208ENST00000574218 LSSP48449 732 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 YWHAEP62258 255 aaKnown RBP12.35□□□□□ -0.43
CTNS-208ENST00000574218 PPP2CBP62714 309 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 PPP2CAP67775 309 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 PPP3CAQ08209 521 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 ELAVL3Q14576 367 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms