RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 FYNP06241 537 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 GP5P40197 560 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 RAP1GDS1P52306 607 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 SLC25A3Q00325 362 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 TUBB3Q13509 450 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 ITGA9Q13797 1035 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 GRB14Q14449 540 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 DLG2Q15700 870 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 TWF2Q6IBS0 349 aaKnown RBP11.5□□□□□ -0.57
RPAIN-212ENST00000573126 NPWQ8N729 165 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 BRI3BPQ8WY22 251 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 MS4A4AQ96JQ5 239 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 SORT1Q99523 831 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 GORASP1Q9BQQ3 440 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 OXCT2Q9BYC2 517 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-212ENST00000573126 ULBP1Q9BZM6 244 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 SNX15Q9NRS6 342 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 COPG2Q9UBF2 871 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 DCDC2Q9UHG0 476 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 CCDC78A2IDD5 438 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 DCLK1O15075 740 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 XPOTO43592 962 aaKnown RBP11.5□□□□□ -0.57
RPAIN-212ENST00000573126 ATP9BO43861 1147 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 SERPINE1P05121 402 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 KCNE1P15382 129 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 PTPN3P26045 913 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 C1orf146Q5VVC0 180 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 IQSEC1Q6DN90 963 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 GPRIN1Q7Z2K8 1008 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 CCNJLQ8IV13 435 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 PSTKQ8IV42 348 aaKnown RBP11.5□□□□□ -0.57
RPAIN-212ENST00000573126 PLD6Q8N2A8 252 aaKnown RBP11.5□□□□□ -0.57
RPAIN-212ENST00000573126 DCLK2Q8N568 766 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 SMG8Q8ND04 991 aaKnown RBP11.5□□□□□ -0.57
RPAIN-212ENST00000573126 AGR3Q8TD06 166 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 GTF3C2Q8WUA4 911 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-212ENST00000573126 UCMAQ8WVF2 138 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 MFSD3Q96ES6 412 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 NAT9Q9BTE0 207 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 CAB39LQ9H9S4 337 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 TMEM30AQ9NV96 361 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 UBP1Q9NZI7 540 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 VANGL2Q9ULK5 521 aa11.5□□□□□ -0.57
RPAIN-212ENST00000573126 APOBEC2Q9Y235 224 aaKnown RBP11.5□□□□□ -0.57
RPAIN-212ENST00000573126 DICER1Q9UPY3 1922 aaKnown RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 BPTFQ12830 3046 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 GOLGA8TH3BQL2 631 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 PTGESO14684 152 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 KIF1CO43896 1103 aaKnown RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 SIN3BO75182 1162 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 ADRA1BP35368 520 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 TUBP50607 506 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 AFF1P51825 1210 aaKnown RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 MFSD10Q14728 455 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 PAFAH1B3Q15102 231 aaKnown RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 HSP90AA5PQ58FG0 334 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 STXBP5Q5T5C0 1151 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 USP50Q70EL3 339 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 LIMS2Q7Z4I7 341 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 STRA8Q7Z7C7 330 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 KBTBD2Q8IY47 623 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 PPP4R1Q8TF05 950 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 IGSF9Q9P2J2 1179 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 SNX10Q9Y5X0 201 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 LIN7AO14910 233 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 ZBTB24O43167 697 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 CIB2O75838 187 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 USP17L7P0C7H9 530 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 RALBP11234 206 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 NCAM1P13591 858 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 AOC1P19801 751 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 WARSP23381 471 aaKnown RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 PGGT1BP53609 377 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 CACNA2D1P54289 1103 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 TPI1P60174 286 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 CDC42EP1Q00587 391 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 CDK18Q07002 472 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 USP4Q13107 963 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 PEX6Q13608 980 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 DNAL1Q4LDG9 190 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 RABGAP1LQ5R372 815 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 CERCAMQ5T4B2 595 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 FSTL4Q6MZW2 842 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 BNIPLQ7Z465 357 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 TLK2Q86UE8 772 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 GSTCDQ8NEC7 633 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 EDEM1Q92611 657 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 MOCOSQ96EN8 888 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 SLC2A13Q96QE2 648 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 TTC1Q99614 292 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 WDR6Q9NNW5 1121 aaKnown RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 CRTAC1Q9NQ79 661 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 ACSS2Q9NR19 701 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 DDIT4Q9NX09 232 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 DDX43Q9NXZ2 648 aaKnown RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 CORO1CQ9ULV4 474 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-212ENST00000573126 SOX13Q9UN79 622 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 SBF1O95248 1867 aa11.49□□□□□ -0.57
RPAIN-212ENST00000573126 PLXNB2O15031 1838 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms