RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 PDIA4P13667 645 aaKnown RBP12.73□□□□□ -0.37
SMIM28-201ENST00000573100 LSSP48449 732 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 PSMD8P48556 350 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 RAD23BP54727 409 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 ERVPABLB-1P60509 514 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 GABREP78334 506 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 PPP3CAQ08209 521 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 VAC14Q08AM6 782 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 OVGP1Q12889 678 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 STAT4Q14765 748 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 HS1BP3Q53T59 392 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.73□□□□□ -0.37
SMIM28-201ENST00000573100 CCDC117Q8IWD4 279 aaPredicted RBP12.73□□□□□ -0.37
SMIM28-201ENST00000573100 UNC45BQ8IWX7 931 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 SLC25A45Q8N413 288 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 TTC9Q92623 222 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 MED8Q96G25 268 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 DPH1Q9BZG8 443 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 CISHQ9NSE2 258 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 ABCC13Q9NSE7 274 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 SLCO3A1Q9UIG8 710 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 INTS6Q9UL03 887 aaKnown RBP12.73□□□□□ -0.37
SMIM28-201ENST00000573100 ERVW-1Q9UQF0 538 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 MTMR6Q9Y217 621 aa12.73□□□□□ -0.37
SMIM28-201ENST00000573100 COL12A1Q99715 3063 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 TULP2O00295 520 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 XPO1O14980 1071 aaKnown RBP12.72□□□□□ -0.37
SMIM28-201ENST00000573100 MAPK13O15264 365 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 SLC28A2O43868 658 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 OPA1O60313 960 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 ACSL4O60488 711 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 USP12O75317 370 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 DXOO77932 396 aaKnown RBP12.72□□□□□ -0.37
SMIM28-201ENST00000573100 ADH1BP00325 375 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 IL1BP01584 269 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 SRPRAP08240 638 aaKnown RBP12.72□□□□□ -0.37
SMIM28-201ENST00000573100 TRIM49P0CI25 452 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 TRIM49CP0CI26 452 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 SLC6A4P31645 630 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 NUDT1P36639 197 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 PPP2CBP62714 309 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 PPP2CAP67775 309 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 ADIGQ0VDE8 80 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 FAM133BQ5BKY9 247 aaKnown RBP12.72□□□□□ -0.37
SMIM28-201ENST00000573100 CDCP2Q5VXM1 449 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 NUGGCQ68CJ6 796 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 INTS8Q75QN2 995 aaKnown RBP12.72□□□□□ -0.37
SMIM28-201ENST00000573100 SIX6OS1Q8N1H7 587 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 STK40Q8N2I9 435 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 CARNMT1Q8N4J0 409 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 HJURPQ8NCD3 748 aaPredicted RBP12.72□□□□□ -0.37
SMIM28-201ENST00000573100 KIAA0895Q8NCT3 520 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 SNRNP27Q8WVK2 155 aaKnown RBP12.72□□□□□ -0.37
SMIM28-201ENST00000573100 AZIN2Q96A70 460 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 FAXDC2Q96IV6 333 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 DEPDC7Q96QD5 511 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 DDX50Q9BQ39 737 aaKnown RBP12.72□□□□□ -0.37
SMIM28-201ENST00000573100 MMRN2Q9H8L6 949 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 POLR1BQ9H9Y6 1135 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 ARHGAP20Q9P2F6 1191 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 DMTF1Q9Y222 760 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
SMIM28-201ENST00000573100 TP53BP1Q12888 1972 aaPredicted RBP12.72□□□□□ -0.37
SMIM28-201ENST00000573100 TYW5A2RUC4 315 aaKnown RBP12.71□□□□□ -0.37
SMIM28-201ENST00000573100 CALUO43852 315 aaPredicted RBP12.71□□□□□ -0.37
SMIM28-201ENST00000573100 KLRC4O43908 158 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 MOCS3O95396 460 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 KRT13P13646 458 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 MAT2AP31153 395 aaKnown RBP12.71□□□□□ -0.37
SMIM28-201ENST00000573100 CTSOP43234 321 aaPredicted RBP12.71□□□□□ -0.37
SMIM28-201ENST00000573100 RPS24P62847 133 aaKnown RBP12.71□□□□□ -0.37
SMIM28-201ENST00000573100 ECT2LQ008S8 904 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 CDH18Q13634 790 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 GOLGA7BQ2TAP0 167 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 PITRM1Q5JRX3 1037 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 RNF219Q5W0B1 726 aaPredicted RBP12.71□□□□□ -0.37
SMIM28-201ENST00000573100 MMS22LQ6ZRQ5 1243 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 TATDN2Q93075 761 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 KLHDC7BQ96G42 594 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 ZNF396Q96N95 335 aaPredicted RBP12.71□□□□□ -0.37
SMIM28-201ENST00000573100 ABCG4Q9H172 646 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 UPF2Q9HAU5 1272 aaKnown RBP12.71□□□□□ -0.37
SMIM28-201ENST00000573100 THSD1Q9NS62 852 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 EXOC1Q9NV70 894 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 FAM13BQ9NYF5 915 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 HESX1Q9UBX0 185 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 CYTH4Q9UIA0 394 aa12.71□□□□□ -0.37
SMIM28-201ENST00000573100 CSO75390 466 aaKnown RBP12.7□□□□□ -0.38
SMIM28-201ENST00000573100 IGLV3-27P01718 113 aa12.7□□□□□ -0.38
SMIM28-201ENST00000573100 CKMT1AP12532 417 aa12.7□□□□□ -0.38
SMIM28-201ENST00000573100 DGKAP23743 735 aa12.7□□□□□ -0.38
SMIM28-201ENST00000573100 MZF1P28698 734 aaPredicted RBP12.7□□□□□ -0.38
SMIM28-201ENST00000573100 NNMTP40261 264 aa12.7□□□□□ -0.38
SMIM28-201ENST00000573100 TBX4P57082 545 aa12.7□□□□□ -0.38
SMIM28-201ENST00000573100 ELAVL3Q14576 367 aaKnown RBP12.7□□□□□ -0.38
SMIM28-201ENST00000573100 FSCBQ5H9T9 825 aa12.7□□□□□ -0.38
SMIM28-201ENST00000573100 KRT39Q6A163 491 aa12.7□□□□□ -0.38
SMIM28-201ENST00000573100 MSANTD2Q6P1R3 559 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms