RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PTRH2Q9Y3E5 179 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ASB1Q9Y576 335 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 PCDHB6Q9Y5E3 794 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 V9GYY5 206 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 LOC100509620A0A075B734 347 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 LOC100653049A0A140TA62 436 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 DENND3A2RUS2 1198 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 C7orf72A4D263 438 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 PRAMEF25A6NGN4 478 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ENO4A6NNW6 628 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 CDRT15L2A8MXV6 281 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 E9PBE3 544 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 IFIT3O14879 490 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 BNIP3LO60238 219 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 DIAPH2O60879 1101 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ZC3H11AO75152 810 aaKnown RBP eCLIP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 LRRN2O75325 713 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ERLIN1O75477 346 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 KRT34O76011 436 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 IPO13O94829 963 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ONECUT2O95948 504 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 VIPP01282 170 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 WEE2P0C1S8 567 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM86B2P0C5J1 330 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ZNF853P0CG23 659 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ARP10275 920 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 NCF1P14598 390 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 PTPN1P18031 435 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 RPA1P27694 616 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ADH6P28332 368 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 PIK3CGP48736 1102 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 CDR1P51861 262 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 PMS2P54278 862 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 HADHBP55084 474 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 NRG3P56975 720 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 POU6F2P78424 691 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 MXRA7P84157 204 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 SF3A3Q12874 501 aaKnown RBP eCLIP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 TMEM115Q12893 351 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 SQLEQ14534 574 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 CCDC57Q2TAC2 916 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 FUT11Q495W5 492 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 CFAP221Q4G0U5 840 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 DCAF12L1Q5VU92 463 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 SLFN12LQ6IEE8 588 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 DENND1BQ6P3S1 775 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 PAPD4Q6PIY7 484 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 AFTPHQ6ULP2 937 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 MAMDC4Q6UXC1 1216 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 RBPMS2Q6ZRY4 209 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 KCTD1Q719H9 257 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 SPATA19Q7Z5L4 167 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 CPNE8Q86YQ8 564 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 CILP2Q8IUL8 1156 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 GLB1L2Q8IW92 636 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM185AQ8N0U4 392 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 Q8N1Y9 231 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 KDM8Q8N371 416 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 BBS5Q8N3I7 341 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM133AQ8N9E0 248 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 XXYLT1Q8NBI6 393 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 RBM15BQ8NDT2 890 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ASB15Q8WXK1 588 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 MIEF2Q96C03 454 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 TMCO6Q96DC7 493 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 C19orf60Q96EN9 201 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 EDC3Q96F86 508 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 TCTN2Q96GX1 697 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 DHTKD1Q96HY7 919 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ATP6V1G3Q96LB4 118 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 WRNIP1Q96S55 665 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 MIPEPQ99797 713 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 BCL7BQ9BQE9 202 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 STRA6Q9BX79 667 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 CAPS2Q9BXY5 557 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 PUS3Q9BZE2 481 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 WDR11Q9BZH6 1224 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 B3GNT4Q9C0J1 378 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 CARD9Q9H257 536 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 NELFAQ9H3P2 528 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC32A1Q9H598 525 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 STN1Q9H668 368 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 COQ10BQ9H8M1 238 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 RPRD1BQ9NQG5 326 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 CENPMQ9NSP4 180 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 NDFIP2Q9NV92 336 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 TMEM184CQ9NVA4 438 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 SIDT1Q9NXL6 827 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 TMOD3Q9NYL9 352 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 KCNH3Q9ULD8 1083 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 RIMKLBQ9ULI2 386 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 NFU1Q9UMS0 254 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC8A2Q9UPR5 921 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 RUVBL1Q9Y265 456 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 COA3Q9Y2R0 106 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 NAALAD2Q9Y3Q0 740 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 TELO2Q9Y4R8 837 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 MAP3K19Q56UN5 1328 aa5.2□□□□□ -1.58
TOPBP1-210ENST00000572787 ADGRF5Q8IZF2 1346 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms