RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 PLCB1Q9NQ66 1216 aa17.9■□□□□ 0.46
LITAF-211ENST00000572255 SCML1Q9UN30 329 aa17.9■□□□□ 0.46
LITAF-211ENST00000572255 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.9■□□□□ 0.46
LITAF-211ENST00000572255 CEP83Q9Y592 693 aa17.9■□□□□ 0.46
LITAF-211ENST00000572255 SLCO1B1Q9Y6L6 691 aa17.9■□□□□ 0.46
LITAF-211ENST00000572255 TTC34A8MYJ7 566 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 SH3BP5O60239 455 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 RNASEH1O60930 286 aaKnown RBP17.89■□□□□ 0.45
LITAF-211ENST00000572255 DAB1O75553 588 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 SNX16P57768 344 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 BPIFB4P59827 614 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 HNRNPDQ14103 355 aaKnown RBP17.89■□□□□ 0.45
LITAF-211ENST00000572255 RABGAP1LQ5R372 815 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 C9orf64Q5T6V5 341 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 TTC39BQ5VTQ0 682 aaPredicted RBP17.89■□□□□ 0.45
LITAF-211ENST00000572255 RNF219Q5W0B1 726 aaPredicted RBP17.89■□□□□ 0.45
LITAF-211ENST00000572255 SLC26A9Q7LBE3 791 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 NAXDQ8IW45 347 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 CCAR2Q8N163 923 aaKnown RBP17.89■□□□□ 0.45
LITAF-211ENST00000572255 GANCQ8TET4 914 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 BIRC7Q96CA5 298 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 SCNM1Q9BWG6 230 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 ADAM33Q9BZ11 813 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 SYNCQ9H7C4 482 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 SGK2Q9HBY8 427 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 SLCO3A1Q9UIG8 710 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 NCKAP1Q9Y2A7 1128 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 ITIH6Q6UXX5 1313 aa17.89■□□□□ 0.45
LITAF-211ENST00000572255 KNL1Q8NG31 2342 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 EDDM13A0A1B0GTR0 161 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 A0A1B0GVM2 712 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 A0A1B0GVT2 93 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 TARSL2A2RTX5 802 aaKnown RBP17.88■□□□□ 0.45
LITAF-211ENST00000572255 TCAF2A6NFQ2 919 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
LITAF-211ENST00000572255 FSBPO95073 299 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 CER1O95813 267 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 PDGFRAP16234 1089 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 MATKP42679 507 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 CSNK1EP49674 416 aaKnown RBP17.88■□□□□ 0.45
LITAF-211ENST00000572255 AFF3P51826 1226 aaKnown RBP17.88■□□□□ 0.45
LITAF-211ENST00000572255 SLC6A3Q01959 620 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 KCNMA1Q12791 1236 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 NME3Q13232 169 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 SLC12A1Q13621 1099 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 RAPGEF1Q13905 1077 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 DRAP1Q14919 205 aaPredicted RBP17.88■□□□□ 0.45
LITAF-211ENST00000572255 CST6Q15828 149 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 FBXL22Q6P050 247 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 IL27RAQ6UWB1 636 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 UNQ6494/PRO21346Q6UXR6 183 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 USP30Q70CQ3 517 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 RPL10LQ96L21 214 aaKnown RBP17.88■□□□□ 0.45
LITAF-211ENST00000572255 GAREM1Q9H706 876 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 IL21RQ9HBE5 538 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 TM9SF3Q9HD45 589 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 FBXL12Q9NXK8 326 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 FHOD1Q9Y613 1164 aa17.88■□□□□ 0.45
LITAF-211ENST00000572255 C1QTNF9BB2RNN3 333 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 MID1O15344 667 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 HYAL3O43820 417 aaPredicted RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 PROS1P07225 676 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 C1QTNF9P0C862 333 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 MZF1P28698 734 aaPredicted RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 NOS2P35228 1153 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 NUMBP49757 651 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 STK19P49842 368 aaPredicted RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 CENPCQ03188 943 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 SFSWAPQ12872 951 aaKnown RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 KCNJ12Q14500 433 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 HLA-BQ31612 363 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 KLHDC7AQ5VTJ3 777 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 CXorf57Q6NSI4 855 aaKnown RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 MMAAQ8IVH4 418 aaKnown RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 ZNF397Q8NF99 534 aaPredicted RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 IGSF8Q969P0 613 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 RPRD1AQ96P16 312 aaPredicted RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 PDCL3Q9H2J4 239 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 OSGEPQ9NPF4 335 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 SAMSN1Q9NSI8 373 aaKnown RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 SERGEFQ9UGK8 458 aa17.87■□□□□ 0.45
LITAF-211ENST00000572255 FNDC3AQ9Y2H6 1198 aaKnown RBP17.87■□□□□ 0.45
LITAF-211ENST00000572255 A0A1W2PP55 124 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 M0QYT0 321 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 ZNF883P0CG24 379 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 CYP11B1P15538 503 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 CD27P26842 260 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 SLC8A1P32418 973 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 IRAK1P51617 712 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 PLK1P53350 603 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 OXCT1P55809 520 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 SULT2A1Q06520 285 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 MTA1Q13330 715 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 AUHQ13825 339 aaKnown RBP17.86■□□□□ 0.45
LITAF-211ENST00000572255 TEAD4Q15561 434 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 TRIP6Q15654 476 aaKnown RBP17.86■□□□□ 0.45
LITAF-211ENST00000572255 OTUD1Q5VV17 481 aaPredicted RBP17.86■□□□□ 0.45
LITAF-211ENST00000572255 KIAA0895LQ68EN5 471 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 ZDHHC17Q8IUH5 632 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 STK40Q8N2I9 435 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms