RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TCRBV21S2A2A0A5A6 115 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 TBC1D3BA6NDS4 549 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 GOLGA8SH3BPF8 625 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CAPN9O14815 690 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 AXIN1O15169 862 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CNTN5O94779 1100 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 EPN2O95208 641 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CAVIN2O95810 425 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 IGLV3-19P01714 112 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 PABPC1P11940 636 aaKnown RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 FERP16591 822 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CDK11BP21127 795 aaKnown RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 RRM1P23921 792 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 HNRNPH3P31942 346 aaKnown RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 CCR1P32246 355 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CNR2P34972 360 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 RFC1P35251 1148 aaPredicted RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 CTSOP43234 321 aaPredicted RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 SLC11A2P49281 568 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 SULT1E1P49888 294 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 NRLP54845 237 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 RPL7AP62424 266 aaKnown RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 CDK17Q00537 523 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 ARID5AQ03989 594 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 SEMA3BQ13214 749 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CAMK2GQ13555 558 aaPredicted RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 AUHQ13825 339 aaKnown RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 SKOR2Q2VWA4 1001 aaPredicted RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 PLEKHG6Q3KR16 790 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 PLK5Q496M5 336 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 BRMS1LQ5PSV4 323 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 PLA2G2CQ5R387 149 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 PEAR1Q5VY43 1037 aaPredicted RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 PMS2CLQ68D20 193 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 PLEKHA7Q6IQ23 1121 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 WDR59Q6PJI9 974 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 PHLDB2Q86SQ0 1253 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CHSY1Q86X52 802 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 MCOLN2Q8IZK6 566 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 LGI2Q8N0V4 545 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CCAR2Q8N163 923 aaKnown RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 CCDC185Q8N715 623 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 ANKRD20A12PQ8NF67 263 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 TSTD1Q8NFU3 115 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CYB5D2Q8WUJ1 264 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 GOLGA1Q92805 767 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 MRGPRX1Q96LB2 322 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 PSMB7Q99436 277 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 EDEM3Q9BZQ6 932 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 HAUS4Q9H6D7 363 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMG6-210ENST00000572205 ELOVL2Q9NXB9 296 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 RRN3Q9NYV6 651 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 IFNKQ9P0W0 207 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 USP36Q9P275 1121 aaKnown RBP8.97□□□□□ -0.97
SMG6-210ENST00000572205 SLC8A2Q9UPR5 921 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CEP83Q9Y592 693 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 CEP295Q9C0D2 2601 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 BPTFQ12830 3046 aa8.97□□□□□ -0.97
SMG6-210ENST00000572205 GON4LQ3T8J9 2241 aa8.96□□□□□ -0.97
SMG6-210ENST00000572205 SYNJ2BP-COX16A0A087WUM0 186 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 IGHV1OR15-9A0A0B4J2B8 117 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 A0A1B0GVM2 712 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 TCAF2A6NFQ2 919 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 DRGXA6NNA5 263 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 FAM72CH0Y354 149 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 CCP110O43303 1012 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 RPP40O75818 363 aaKnown RBP8.96□□□□□ -0.98
SMG6-210ENST00000572205 APOEP02649 317 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 TPM2P07951 284 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 HLA-EP13747 358 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 MZF1P28698 734 aaPredicted RBP8.96□□□□□ -0.98
SMG6-210ENST00000572205 RDXP35241 583 aaKnown RBP8.96□□□□□ -0.98
SMG6-210ENST00000572205 CSKP41240 450 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 PLK1P53350 603 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 NRG1Q02297 640 aaPredicted RBP8.96□□□□□ -0.98
SMG6-210ENST00000572205 SCAPQ12770 1279 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 NME3Q13232 169 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 LPAL2Q16609 132 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 ASTE1Q2TB18 679 aaPredicted RBP8.96□□□□□ -0.98
SMG6-210ENST00000572205 PITRM1Q5JRX3 1037 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 EOGTQ5NDL2 527 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 FAM72AQ5TYM5 149 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 MBLAC2Q68D91 279 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 LAIR1Q6GTX8 287 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 FAM72DQ6L9T8 149 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 CHST9Q7L1S5 443 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 STRADAQ7RTN6 431 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 NLRP14Q86W24 1093 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 FAM72BQ86X60 149 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 FAM131BQ86XD5 332 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 MFN1Q8IWA4 741 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 APCDD1Q8J025 514 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 AHI1Q8N157 1196 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 ZNF366Q8N895 744 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 WFIKKN2Q8TEU8 576 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 RXFP2Q8WXD0 754 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 ATRIPQ8WXE1 791 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 RLN3Q8WXF3 142 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 EXOC4Q96A65 974 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms