RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ZNF217O75362 1048 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 RRM1P23921 792 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 TNFRSF4P43489 277 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 SLC6A11P48066 632 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 PITX1P78337 314 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-205ENST00000571028 CDK17Q00537 523 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 PTP4A2Q12974 167 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 DHCR24Q15392 516 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 PREPLQ4J6C6 727 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-205ENST00000571028 EMC10Q5UCC4 262 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 DNAJC24Q6P3W2 148 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 MON1BQ7L1V2 547 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 SLC26A9Q7LBE3 791 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 DDX42Q86XP3 938 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC40-205ENST00000571028 ZDHHC17Q8IUH5 632 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 SFTPA1Q8IWL2 248 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 DQX1Q8TE96 717 aaKnown RBP13.81□□□□□ -0.2
CCDC40-205ENST00000571028 SETD7Q8WTS6 366 aaKnown RBP13.81□□□□□ -0.2
CCDC40-205ENST00000571028 RNF34Q969K3 372 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 ZNF653Q96CK0 615 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 FAM204AQ9H8W3 233 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 NHEJ1Q9H9Q4 299 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-205ENST00000571028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC40-205ENST00000571028 CALCOCO1Q9P1Z2 691 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 LSM7Q9UK45 103 aaKnown RBP13.81□□□□□ -0.2
CCDC40-205ENST00000571028 CACNA1EQ15878 2313 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 TBC1D3BA6NDS4 549 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 ADAM23O75077 832 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 DAB1O75553 588 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 STC2O76061 302 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 ADH5P11766 374 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 KRT3P12035 628 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 HOXB2P14652 356 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 CORO1AP31146 461 aaKnown RBP13.8□□□□□ -0.2
CCDC40-205ENST00000571028 SULT1E1P49888 294 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 TBX4P57082 545 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 COG7P83436 770 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
CCDC40-205ENST00000571028 NME3Q13232 169 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 GAB4Q2WGN9 574 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 ALKBH5Q6P6C2 394 aaKnown RBP13.8□□□□□ -0.2
CCDC40-205ENST00000571028 KLHDC10Q6PID8 442 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 TAC4Q86UU9 113 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 ZNF513Q8N8E2 541 aaPredicted RBP13.8□□□□□ -0.2
CCDC40-205ENST00000571028 JOSD2Q8TAC2 188 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 ZFRQ96KR1 1074 aaKnown RBP13.8□□□□□ -0.2
CCDC40-205ENST00000571028 CFAP57Q96MR6 1250 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 UBL7Q96S82 380 aaPredicted RBP13.8□□□□□ -0.2
CCDC40-205ENST00000571028 TRIM62Q9BVG3 475 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 ASNSD1Q9NWL6 643 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 WDR35Q9P2L0 1181 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 CNOT8Q9UFF9 292 aaKnown RBP13.8□□□□□ -0.2
CCDC40-205ENST00000571028 KIAA1549LQ6ZVL6 1849 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 OBSL1O75147 1896 aa13.8□□□□□ -0.2
CCDC40-205ENST00000571028 ASH1LQ9NR48 2969 aaKnown RBP13.8□□□□□ -0.2
CCDC40-205ENST00000571028 M0QYT0 321 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 TRUB2O95900 331 aaKnown RBP13.79□□□□□ -0.2
CCDC40-205ENST00000571028 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
CCDC40-205ENST00000571028 GLI1P08151 1106 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 GZMAP12544 262 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 GABRG2P18507 467 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 TFE3P19532 575 aaPredicted RBP13.79□□□□□ -0.2
CCDC40-205ENST00000571028 FLT3P36888 993 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 MATKP42679 507 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 KIR2DL1P43626 348 aaPredicted RBP13.79□□□□□ -0.2
CCDC40-205ENST00000571028 ATP11AP98196 1134 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
CCDC40-205ENST00000571028 GSE1Q14687 1217 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 WDR45BQ5MNZ6 344 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 SDE2Q6IQ49 451 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 MSANTD2Q6P1R3 559 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 DCUN1D2Q6PH85 259 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 DENND1CQ8IV53 801 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 BBS7Q8IWZ6 715 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 ADGRG2Q8IZP9 1017 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 KIAA1958Q8N8K9 716 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 RXFP2Q8WXD0 754 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 MCEEQ96PE7 176 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 SLC2A13Q96QE2 648 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 ZDHHC5Q9C0B5 715 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 THAP2Q9H0W7 228 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 DDIT4Q9NX09 232 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 IMPACTQ9P2X3 320 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 CYP8B1Q9UNU6 501 aa13.79□□□□□ -0.2
CCDC40-205ENST00000571028 ANAPC1Q9H1A4 1944 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 IGHV1OR15-9A0A0B4J2B8 117 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 SSU72P8A0A1W2PR75 194 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 E2F8A0AVK6 867 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 ANKRD62A6NC57 917 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 SOWAHDA6NJG2 315 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 PDGFRAP16234 1089 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 NOS2P35228 1153 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 MESP2Q0VG99 397 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 GRIK2Q13002 908 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
CCDC40-205ENST00000571028 SLC18A3Q16572 532 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 CDO1Q16878 200 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 ZC3H12AQ5D1E8 599 aaKnown RBP13.78□□□□□ -0.2
CCDC40-205ENST00000571028 C10orf76Q5T2E6 689 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 TRNP1Q6NT89 227 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms