RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 CCDC33Q8N5R6 958 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 NAT8LQ8N9F0 302 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 TSC22D3Q99576 134 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 WDR83Q9BRX9 315 aaKnown RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 TTLL2Q9BWV7 592 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 OSBPL2Q9H1P3 480 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 WDCPQ9H6R7 721 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 CIDEBQ9UHD4 219 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 CROTQ9UKG9 612 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 H7C0C1 242 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 RIPK2O43353 540 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 SKAP2O75563 359 aaPredicted RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 TBX18O95935 607 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 NUDT17P0C025 328 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 VAV1P15498 845 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 ERCC2P18074 760 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 YWHAQP27348 245 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 ATP5OP48047 213 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 HTRA4P83105 476 aaPredicted RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 CBLBQ13191 982 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 EFHC2Q5JST6 749 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 BTBD8Q5XKL5 378 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 DARS2Q6PI48 645 aaKnown RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 ZCCHC9Q8N567 271 aaKnown RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 NPWQ8N729 165 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 BBOF1Q8ND07 529 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 CCHCR1Q8TD31 782 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 C2orf15Q8WU43 125 aaKnown RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 UBLCP1Q8WVY7 318 aaPredicted RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 DPF3Q92784 378 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 ZNF558Q96NG5 402 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 QKIQ96PU8 341 aaKnown RBP eCLIP10.13□□□□□ -0.79
TCF4-245ENST00000570177 SH3GL1Q99961 368 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 HERC2P3Q9BVR0 1158 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 FBXO44Q9H4M3 255 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 FAM204AQ9H8W3 233 aa10.13□□□□□ -0.79
TCF4-245ENST00000570177 DNAJC17Q9NVM6 304 aaKnown RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 CXXC1Q9P0U4 656 aaPredicted RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 RABL2AQ9UBK7 228 aaPredicted RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 MTRF1LQ9UGC7 380 aaKnown RBP10.13□□□□□ -0.79
TCF4-245ENST00000570177 ALPK3Q96L96 1907 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 SLC38A8A6NNN8 435 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 H3BRJ5 948 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 EFCAB14O75071 495 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 RNF40O75150 1001 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 BAIAP3O94812 1187 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 KIAA0754O94854 1291 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 TMEM63AO94886 807 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 LRIG2O94898 1065 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 LUC7L3O95232 432 aaKnown RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 HMGA1P17096 107 aaKnown RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 HOXC13P31276 330 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 ARL4AP40617 200 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 ACTN3Q08043 901 aaPredicted RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 TAF10Q12962 218 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 EIF2B5Q13144 721 aaKnown RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 BLMHQ13867 455 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 SLC29A2Q14542 456 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 MORF4L2Q15014 288 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 PRKD1Q15139 912 aaPredicted RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 MGAT5BQ3V5L5 792 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 MSS51Q4VC12 460 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 SLC45A4Q5BKX6 768 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 BRMS1LQ5PSV4 323 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 FAAH2Q6GMR7 532 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 DENND5BQ6ZUT9 1274 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 DDX53Q86TM3 631 aaKnown RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 ZNF683Q8IZ20 524 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 ZSCAN18Q8TBC5 510 aaPredicted RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 GIPC2Q8TF65 315 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 SREK1Q8WXA9 508 aaKnown RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 RSAD2Q8WXG1 361 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 BADQ92934 168 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 FCRL2Q96LA5 508 aaPredicted RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 HAPLN3Q96S86 360 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 LGMNQ99538 433 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 SEPT5Q99719 369 aaPredicted RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 TRIM62Q9BVG3 475 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 MCOLN1Q9GZU1 580 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 CDC42EP4Q9H3Q1 356 aaKnown RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 ACTR5Q9H9F9 607 aaPredicted RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 TMBIM4Q9HC24 238 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.12□□□□□ -0.79
TCF4-245ENST00000570177 COMMD8Q9NX08 183 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 SPG21Q9NZD8 308 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 OR12D3Q9UGF7 316 aa10.12□□□□□ -0.79
TCF4-245ENST00000570177 AFF4Q9UHB7 1163 aaKnown RBP10.12□□□□□ -0.79
TCF4-245ENST00000570177 EIF3FO00303 357 aaPredicted RBP10.11□□□□□ -0.79
TCF4-245ENST00000570177 EEF2KO00418 725 aaKnown RBP10.11□□□□□ -0.79
TCF4-245ENST00000570177 C2CD2LO14523 706 aa10.11□□□□□ -0.79
TCF4-245ENST00000570177 KCNN4O15554 427 aa10.11□□□□□ -0.79
TCF4-245ENST00000570177 PAGE1O75459 146 aa10.11□□□□□ -0.79
TCF4-245ENST00000570177 GCATO75600 419 aa10.11□□□□□ -0.79
TCF4-245ENST00000570177 IGLV3-27P01718 113 aa10.11□□□□□ -0.79
TCF4-245ENST00000570177 CCDC166P0CW27 439 aa10.11□□□□□ -0.79
TCF4-245ENST00000570177 MAGEA6P43360 314 aa10.11□□□□□ -0.79
TCF4-245ENST00000570177 CCT8P50990 548 aa10.11□□□□□ -0.79
TCF4-245ENST00000570177 KCNJ11Q14654 390 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms