RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 CD99P14209 185 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 GSPT1P15170 499 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 NME1P15531 152 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 CAPN3P20807 821 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 C5AR1P21730 350 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 HLA-FP30511 346 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 POLR2BP30876 1174 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 MAT2AP31153 395 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 UGT1A3P35503 534 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 PLA2G4AP47712 749 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 LIG4P49917 911 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 ARSDP51689 593 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 MAPK10P53779 464 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 SMTNP53814 917 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 ARID5BQ14865 1188 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 EARS2Q5JPH6 523 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 KLHDC10Q6PID8 442 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 CHST9Q7L1S5 443 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 ADIPOR2Q86V24 386 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 MMAAQ8IVH4 418 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC35F3Q8IY50 421 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 AADATQ8N5Z0 425 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 LRRC52Q8N7C0 313 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 SCAMP5Q8TAC9 235 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 ERMNQ8TAM6 284 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 HDAC11Q96DB2 347 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 BICD1Q96G01 975 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 HAPLN3Q96S86 360 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 IL12RB2Q99665 862 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 EFHD1Q9BUP0 239 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 ELOVL4Q9GZR5 314 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 CYP4F12Q9HCS2 524 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 KCNJ14Q9UNX9 436 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 SNX9Q9Y5X1 595 aa6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 MN1Q10571 1320 aaPredicted RBP6.9□□□□□ -1.3
HERPUD1-217ENST00000569429 TLN2Q9Y4G6 2542 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 A0A1W2PQM1 296 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 FAM221AA4D161 298 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 TMEM200CA6NKL6 621 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 PRSS44E7EML9 344 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 H3BM21 787 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 SLC7A4O43246 635 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 AQP9O43315 295 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 NEMFO60524 1076 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 CBX6O95503 412 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 KLKB1P03952 638 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 PDGFAP04085 211 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 CSF2P04141 144 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 OR52Z1P0C646 297 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 NOS2P35228 1153 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 PGFP49763 221 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 FXR2P51116 673 aaKnown RBP eCLIP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 COPB1P53618 953 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 RNASE9P60153 205 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 MC1RQ01726 317 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 NUCB1Q02818 461 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 GNL2Q13823 731 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 GSE1Q14687 1217 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 ZRSR2Q15696 482 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 DEFB133Q30KQ1 61 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 HNRNPA1L2Q32P51 320 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 TSGA10IPQ3SY00 556 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 POM121L1PQ3SYA9 428 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 ZNF542PQ5EBM4 170 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 C9orf64Q5T6V5 341 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 DIEXFQ68CQ4 756 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 B4GALNT3Q6L9W6 998 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 CXXC5Q7LFL8 322 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 DCP2Q8IU60 420 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 ZC3H3Q8IXZ2 948 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 CACNA2D3Q8IZS8 1091 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 AHI1Q8N157 1196 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 SLC22A18ASQ8N1D0 253 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 CPXM2Q8N436 756 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 OR13H1Q8NG92 308 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 CXorf38Q8TB03 319 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 FAM174AQ8TBP5 190 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 KBTBD7Q8WVZ9 684 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 MYO19Q96H55 970 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 PPP1R13BQ96KQ4 1090 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 AIFM3Q96NN9 605 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 MSTO1Q9BUK6 570 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 CALN1Q9BXU9 219 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 INTS2Q9H0H0 1204 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 SEMA6CQ9H3T2 930 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 MTG2Q9H4K7 406 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 DNAJC28Q9NX36 388 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 PADI4Q9UM07 663 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 AGAP1Q9UPQ3 857 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 DAAM1Q9Y4D1 1078 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 PCDHGA3Q9Y5H0 932 aa6.89□□□□□ -1.31
HERPUD1-217ENST00000569429 TARSL2A2RTX5 802 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 SFI1A8K8P3 1242 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 H0YCG3 227 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 HNRNPDLO14979 420 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 PLRG1O43660 514 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 PPP1R37O75864 691 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 ADH1BP00325 375 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms