RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 CLUHO75153 1309 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 GOLGA6L7A0A1B0GV03 622 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 FGF10O15520 208 aaPredicted RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 ZBTB24O43167 697 aaPredicted RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 CDH16O75309 829 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 BAIAP3O94812 1187 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 GJB5O95377 273 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 CPP00450 1065 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 AGTP01019 485 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 CSH1P0DML2 217 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 CSH2P0DML3 217 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 KRT15P19012 456 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 PTPN3P26045 913 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 FDFT1P37268 417 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 CRADDP78560 199 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 FPGSQ05932 587 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 PPIDQ08752 370 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 GALNT2Q10471 571 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 PPIGQ13427 754 aaKnown RBP eCLIP7.25□□□□□ -1.25
SMG1-215ENST00000568239 EFTUD2Q15029 972 aaKnown RBP eCLIP7.25□□□□□ -1.25
SMG1-215ENST00000568239 TRIP4Q15650 581 aaPredicted RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 HECTD3Q5T447 861 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 DDX53Q86TM3 631 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 CAND1Q86VP6 1230 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 CHSY1Q86X52 802 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 SRRM1Q8IYB3 904 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 C7orf61Q8IZ16 206 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 HDAC11Q96DB2 347 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 SLC39A13Q96H72 371 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 BTN2A3PQ96KV6 586 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 WDR83Q9BRX9 315 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 TRIM56Q9BRZ2 755 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 UBE2OQ9C0C9 1292 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 SLC39A8Q9C0K1 460 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 RC3H2Q9HBD1 1191 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 KCNK9Q9NPC2 374 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 TRPM5Q9NZQ8 1165 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 ZC3H7BQ9UGR2 993 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 ARHGAP42A6NI28 874 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 E7ESA3 106 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 SCAMP3O14828 347 aaKnown RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 EIF3HO15372 352 aaKnown RBP eCLIP7.24□□□□□ -1.256e-8■■■■■ 37.1
SMG1-215ENST00000568239 TEX28O15482 410 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 USP12O75317 370 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 CNTN5O94779 1100 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 ABLIM3O94929 683 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 EFEMP2O95967 443 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 ABHD2P08910 425 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 IRF1P10914 325 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 ATP5DP30049 168 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 PPM1AP35813 382 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 IRAK1P51617 712 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 COG7P83436 770 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 ZBTB17Q13105 803 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 OLIG2Q13516 323 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 SEMA5AQ13591 1074 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 SMAD1Q15797 465 aaKnown RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 PARP6Q2NL67 630 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 TPGS2Q68CL5 300 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 LEKR1Q6ZMV7 388 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 TAOK1Q7L7X3 1001 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 TAX1BP1Q86VP1 789 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 CIR1Q86X95 450 aaPredicted RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 CTAGE3PQ8IX95 158 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 CYP4X1Q8N118 509 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 MGARPQ8TDB4 240 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 TMEM109Q9BVC6 243 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 HERC2P3Q9BVR0 1158 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 ZYG11BQ9C0D3 744 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 TRPC7Q9HCX4 862 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 SMPD4Q9NXE4 827 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 DNMT3LQ9UJW3 386 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 RAD54BQ9Y620 910 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 PLXNA3P51805 1871 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 LTBP2Q14767 1821 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 ZNF840PA6NDX5 716 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 RASA4BC9J798 803 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 MTSS1O43312 755 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 RASA4O43374 803 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 HARS2P49590 506 aaKnown RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 TEX44Q53QW1 395 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 ALFQ53S48 1182 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 FBXL22Q6P050 247 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 RFWD3Q6PCD5 774 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 TADA2BQ86TJ2 420 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 EXOC3L1Q86VI1 746 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 CFAP52Q8N1V2 620 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 MPP5Q8N3R9 675 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 RTL3Q8N8U3 475 aaKnown RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 DNAAF3Q8N9W5 541 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 KLHL23Q8NBE8 558 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 TLCD1Q96CP7 247 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 C1orf74Q96LT6 269 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 XPO6Q96QU8 1125 aaKnown RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 APOL2Q9BQE5 337 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 FAM107BQ9H098 131 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 ALG13Q9NP73 1137 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms