RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 C1QTNF9BB2RNN3 333 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 M0QYT0 321 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 MID1O15344 667 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 BCAT2O15382 392 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 HYAL3O43820 417 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 HSF2BPO75031 334 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 MOCS3O95396 460 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 SEMA4FO95754 770 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 ASLP04424 464 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 C1QTNF9P0C862 333 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 VAV1P15498 845 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 ABCB4P21439 1286 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 ERCC5P28715 1186 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 CCR1P32246 355 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 PSMD8P48556 350 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 KLK7P49862 253 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 SLC6A3Q01959 620 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 EIF4EBP2Q13542 120 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 HNRNPA1L2Q32P51 320 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 KLHDC7AQ5VTJ3 777 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 RNF219Q5W0B1 726 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 FBXL22Q6P050 247 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 PHLDB2Q86SQ0 1253 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 FAM71AQ8IYT1 594 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 STK40Q8N2I9 435 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 ZNF557Q8N988 423 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 BIRC7Q96CA5 298 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 RPRD1AQ96P16 312 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 PRMT1Q99873 361 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 SCNM1Q9BWG6 230 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 ADAM33Q9BZ11 813 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 IRX2Q9BZI1 471 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 SIK2Q9H0K1 926 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 RSPH9Q9H1X1 276 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 VPS16Q9H269 839 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 GAREM1Q9H706 876 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 FBXL12Q9NXK8 326 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 DACH1Q9UI36 760 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 VANGL2Q9ULK5 521 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 NFE2L3Q9Y4A8 694 aa12.62□□□□□ -0.39
GTF3C1-208ENST00000567843 PCDH15Q96QU1 1955 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 CABIN1Q9Y6J0 2220 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 A0A1W2PP55 124 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 GOLGA8SH3BPF8 625 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 PLK4O00444 970 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 PAGE1O75459 146 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 DAB1O75553 588 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 RNASEH2AO75792 299 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 GLI1P08151 1106 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 CYP11B1P15538 503 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 SULT1E1P49888 294 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 SHC2P98077 582 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 ECT2LQ008S8 904 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 AUHQ13825 339 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 CST6Q15828 149 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 C9orf64Q5T6V5 341 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 OTUD1Q5VV17 481 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 OR52K2Q8NGK3 314 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 C1orf216Q8TAB5 229 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 NEUROG2Q9H2A3 272 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 PABPC3Q9H361 631 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 ANLNQ9NQW6 1124 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 DNAAF2Q9NVR5 837 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 FNDC3AQ9Y2H6 1198 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 HS3ST4Q9Y661 456 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 FRYQ5TBA9 3013 aa12.61□□□□□ -0.39
GTF3C1-208ENST00000567843 BNIP3LO60238 219 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 RNASEH1O60930 286 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 GJB3O75712 270 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 ADCY5O95622 1261 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 UCHL3P15374 230 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 NOS2P35228 1153 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 METAP1P53582 386 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 BPIFB4P59827 614 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 ZBTB16Q05516 673 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 KIF19Q2TAC6 998 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 HLA-BQ31612 363 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 POM121L1PQ3SYA9 428 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 ACCSLQ4AC99 568 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 TCP11X2Q5H9J9 407 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 RABGAP1LQ5R372 815 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 PRAMEF14Q5SWL7 426 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 FAM102AQ5T9C2 384 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 CXorf57Q6NSI4 855 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 SLC26A9Q7LBE3 791 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 NOP9Q86U38 636 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 ERICH1Q86X53 443 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 CHCHD4Q8N4Q1 142 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 PNPLA1Q8N8W4 532 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 TMEM35BQ8NCS4 154 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 GPT2Q8TD30 523 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 SETD7Q8WTS6 366 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 CPA5Q8WXQ8 436 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 FAM129BQ96TA1 746 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 TBCBQ99426 244 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms