RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 E9PAM4 449 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 TIMM44O43615 452 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 CLDN11O75508 207 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 MTA2O94776 668 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 H2AFZP0C0S5 128 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 PSMA2P25787 234 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 MIPP30301 263 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 L1CAMP32004 1257 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 PCK1P35558 622 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 TIE1P35590 1138 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 CDH4P55283 916 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 SEC13P55735 322 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 DMC1Q14565 340 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 ACAP1Q15027 740 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 CRY1Q16526 586 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 FUT11Q495W5 492 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 RABGAP1LQ5R372 815 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 NUDT18Q6ZVK8 323 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 H2AFVQ71UI9 128 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 SLFN11Q7Z7L1 901 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 NLRP14Q86W24 1093 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 AHI1Q8N157 1196 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 CCDC33Q8N5R6 958 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 ZNF513Q8N8E2 541 aaPredicted RBP12.79□□□□□ -0.36
RNF40-211ENST00000567365 ACDQ96AP0 544 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 CCDC42Q96M95 316 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 NUP85Q9BW27 656 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 IMPACTQ9P2X3 320 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 PPARGC1AQ9UBK2 798 aaKnown RBP12.79□□□□□ -0.36
RNF40-211ENST00000567365 OR12D3Q9UGF7 316 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 INTUQ9ULD6 942 aa12.79□□□□□ -0.36
RNF40-211ENST00000567365 CCDC163A0A0D9SF12 145 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 TYW5A2RUC4 315 aaKnown RBP12.78□□□□□ -0.36
RNF40-211ENST00000567365 NPC1O15118 1278 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 LILRB5O75023 590 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 LRIG2O94898 1065 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 KLF8O95600 359 aaPredicted RBP12.78□□□□□ -0.36
RNF40-211ENST00000567365 TCF4P15884 667 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 IL1R2P27930 398 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 NTSR1P30989 418 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 IL12RB1P42701 662 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 DMWDQ09019 674 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 SLC12A1Q13621 1099 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 CDH18Q13634 790 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 CA9Q16790 459 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 PLEKHG6Q3KR16 790 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 ARL13BQ3SXY8 428 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 PITRM1Q5JRX3 1037 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 DAB2IPQ5VWQ8 1189 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 MBLAC2Q68D91 279 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 RASSF3Q86WH2 238 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 CCDC170Q8IYT3 715 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 PYROXD2Q8N2H3 581 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 CARNMT1Q8N4J0 409 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 CAMKK1Q8N5S9 505 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 SORCS1Q8WY21 1168 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 BTBD6Q96KE9 485 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 MRGPRX3Q96LB0 322 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 NCAPGQ9BPX3 1015 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 FAM126AQ9BYI3 521 aaPredicted RBP12.78□□□□□ -0.36
RNF40-211ENST00000567365 ZYG11BQ9C0D3 744 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 TMEM245Q9H330 911 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 DEF6Q9H4E7 631 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 RETREG1Q9H6L5 497 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 MPP6Q9NZW5 540 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 KIAA1522Q9P206 1035 aaPredicted RBP12.78□□□□□ -0.36
RNF40-211ENST00000567365 UVRAGQ9P2Y5 699 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 EBF1Q9UH73 591 aa12.78□□□□□ -0.36
RNF40-211ENST00000567365 OTOGLQ3ZCN5 2332 aa12.77□□□□□ -0.36
RNF40-211ENST00000567365 WASH3PC4AMC7 463 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 PROB1E7EW31 1015 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 DLDP09622 509 aaKnown RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 MZF1P28698 734 aaPredicted RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 CSKP41240 450 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 NBL1P41271 181 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 VASPP50552 380 aaPredicted RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 SLC25A11Q02978 314 aaKnown RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 CSTF1Q05048 431 aaKnown RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 PIGHQ14442 188 aaPredicted RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 ZNF234Q14588 700 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 EOGTQ5NDL2 527 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 LRRC31Q6UY01 552 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 RAD9BQ6WBX8 426 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 TRMT11Q7Z4G4 463 aaKnown RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 SETD3Q86TU7 594 aaPredicted RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 CPNE8Q86YQ8 564 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 TMTC1Q8IUR5 882 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 PSTKQ8IV42 348 aaKnown RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 APCDD1Q8J025 514 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 KDM1BQ8NB78 822 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 CTNNBL1Q8WYA6 563 aaPredicted RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 PSMB7Q99436 277 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 FEM1AQ9BSK4 669 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 SNRNP25Q9BV90 132 aaKnown RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 IRF2BPLQ9H1B7 796 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 OSGEPQ9NPF4 335 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 NDFIP2Q9NV92 336 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 CACNA2D2Q9NY47 1150 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 IP6K2Q9UHH9 426 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms