RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 MAPKAPK2P49137 400 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 CCR3P51677 355 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 NAP1L1P55209 391 aaKnown RBP12.53□□□□□ -0.4
SF3B3-208ENST00000567250 SLC25A11Q02978 314 aaKnown RBP12.53□□□□□ -0.4
SF3B3-208ENST00000567250 MESDQ14696 234 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 C11orf63Q6NUN7 778 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 POLNQ7Z5Q5 900 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 CIR1Q86X95 450 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-208ENST00000567250 ZNF683Q8IZ20 524 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 ZNF513Q8N8E2 541 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-208ENST00000567250 TMEM105Q8N8V8 129 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 PRRX2Q99811 253 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 LRFN3Q9BTN0 628 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 CIPCQ9C0C6 399 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 DHX35Q9H5Z1 703 aaKnown RBP12.53□□□□□ -0.4
SF3B3-208ENST00000567250 RBM12Q9NTZ6 932 aaKnown RBP12.53□□□□□ -0.4
SF3B3-208ENST00000567250 DLGAP2Q9P1A6 1054 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 STARD13Q9Y3M8 1113 aa12.53□□□□□ -0.4
SF3B3-208ENST00000567250 ZDBF2Q9HCK1 2354 aa12.52□□□□□ -0.4
SF3B3-208ENST00000567250 CHD5Q8TDI0 1954 aa12.52□□□□□ -0.4
SF3B3-208ENST00000567250 DRGXA6NNA5 263 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 CHURC1-FNTBB4DL54 471 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 H3BRJ5 948 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 K7EQS6 105 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 EEF2KO00418 725 aaKnown RBP12.52□□□□□ -0.41
SF3B3-208ENST00000567250 TIMM44O43615 452 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 PI15O43692 258 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 SPOPO43791 374 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.41
SF3B3-208ENST00000567250 POLR2EP19388 210 aaKnown RBP12.52□□□□□ -0.41
SF3B3-208ENST00000567250 EPHB2P29323 1055 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 OR1E1P30953 314 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 HOXC13P31276 330 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 SEC13P55735 322 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 SULT2A1Q06520 285 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 LMAN2Q12907 356 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 FZD5Q13467 585 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 DPYSL2Q16555 572 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 GEN1Q17RS7 908 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 ODF2Q5BJF6 829 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 PPP6R3Q5H9R7 873 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-208ENST00000567250 ZFYVE27Q5T4F4 411 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 SDE2Q6IQ49 451 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 ZNF783Q6ZMS7 281 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 TFAP2DQ7Z6R9 452 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 C14orf80Q86SX3 495 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 SPEM1Q8N4L4 309 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 ARFGAP1Q8N6T3 406 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 RPLP0P6Q8NHW5 317 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 WFDC5Q8TCV5 224 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 HSPH1Q92598 858 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 MYEOVQ96EZ4 313 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 P2RY11Q96G91 374 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 PEBP4Q96S96 227 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 DESI2Q9BSY9 194 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 MUC3BQ9H195 1237 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 FBRSL1Q9HCM7 1045 aaKnown RBP12.52□□□□□ -0.41
SF3B3-208ENST00000567250 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.52□□□□□ -0.41
SF3B3-208ENST00000567250 TMEM248Q9NWD8 314 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 SPATA6Q9NWH7 488 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-208ENST00000567250 MPP6Q9NZW5 540 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 TBC1D30Q9Y2I9 924 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 REXO2Q9Y3B8 237 aaKnown RBP12.52□□□□□ -0.41
SF3B3-208ENST00000567250 SNX10Q9Y5X0 201 aa12.52□□□□□ -0.41
SF3B3-208ENST00000567250 ZNF318Q5VUA4 2279 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 PRRT4C9JH25 899 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 TRIM24O15164 1050 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 DAPK3O43293 454 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 LAMTOR5O43504 91 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 KRT86O43790 486 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 CD70P32970 193 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 GJC1P36383 396 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 CSKP41240 450 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 IRAK1P51617 712 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 ST8SIA6P61647 398 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 CCZ1BP86790 482 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 CCZ1P86791 482 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-208ENST00000567250 CCDC173Q0VFZ6 552 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 MESP2Q0VG99 397 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 SEMA3BQ13214 749 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 KRT81Q14533 505 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 PLEKHG6Q3KR16 790 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 FUT11Q495W5 492 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 ALFQ53S48 1182 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 PITRM1Q5JRX3 1037 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 EOGTQ5NDL2 527 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 DAB2IPQ5VWQ8 1189 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 RNF219Q5W0B1 726 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-208ENST00000567250 MBLAC2Q68D91 279 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 CXorf57Q6NSI4 855 aaKnown RBP12.51□□□□□ -0.41
SF3B3-208ENST00000567250 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 Q6ZS52 159 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 CYP4V2Q6ZWL3 525 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-208ENST00000567250 KIAA0907Q7Z7F0 614 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-208ENST00000567250 DAAM2Q86T65 1068 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 MAP7D3Q8IWC1 876 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 RHOT1Q8IXI2 618 aa12.51□□□□□ -0.41
SF3B3-208ENST00000567250 SYCE1Q8N0S2 351 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms