RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SMG8Q8ND04 991 aaKnown RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 ZNF560Q96MR9 790 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 IPPQ9Y573 584 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 RAD54BQ9Y620 910 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 PIRO00625 290 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 XPO1O14980 1071 aaKnown RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 DAB1O75553 588 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 CHRNA1P02708 482 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 GOT1P17174 413 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 GARSP41250 739 aaKnown RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 SLC1A6P48664 564 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 CDK7P50613 346 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 SESN3P58005 492 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 AP2B1P63010 937 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 GRIK3Q13003 919 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 PAFAH1B3Q15102 231 aaKnown RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 SPANXN3Q5MJ09 141 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 RABGAP1LQ5R372 815 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 N4BP2L1Q5TBK1 243 aaPredicted RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 CLEC4CQ8WTT0 213 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 KBTBD7Q8WVZ9 684 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 WNT8BQ93098 351 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 NT5C3BQ969T7 300 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 ZNF184Q99676 751 aaPredicted RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 TRIM56Q9BRZ2 755 aaKnown RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 TSEN34Q9BSV6 310 aaKnown RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 CXCL16Q9H2A7 254 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 DDX43Q9NXZ2 648 aaKnown RBP17.19■□□□□ 0.34
CMTM3-213ENST00000566756 TUBGCP4Q9UGJ1 667 aa17.19■□□□□ 0.34
CMTM3-213ENST00000566756 SMIM28A0A1B0GU29 152 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 MOXD2PA6NHM9 499 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 PRR5-ARHGAP8B1AHC4 643 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 TPP1O14773 563 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 FKTNO75072 461 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 PROCP04070 461 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 ITGA2BP08514 1039 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 GP5P40197 560 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 MAGEA12P43365 314 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 ATXN1P54253 815 aaKnown RBP17.18■□□□□ 0.34
CMTM3-213ENST00000566756 ARHGAP8P85298 464 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 PCLAFQ15004 111 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 CCDC153Q494R4 210 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 FBXO47Q5MNV8 452 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 GRTP1Q5TC63 336 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 SLAIN1Q8ND83 568 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 PPP4R1Q8TF05 950 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 CPNE1Q99829 537 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 DPEP3Q9H4B8 488 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 ZNF395Q9H8N7 513 aaPredicted RBP17.18■□□□□ 0.34
CMTM3-213ENST00000566756 SAGE1Q9NXZ1 904 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 ST3GAL5Q9UNP4 418 aa17.18■□□□□ 0.34
CMTM3-213ENST00000566756 APOBEC2Q9Y235 224 aaKnown RBP17.18■□□□□ 0.34
CMTM3-213ENST00000566756 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.18■□□□□ 0.34
CMTM3-213ENST00000566756 DPPA5A6NC42 116 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 RNF103O00237 685 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 GPR182O15218 404 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 POLBP06746 335 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 FAM163BP0C2L3 166 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 KITP10721 976 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 CCDC130P13994 396 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 AKAP5P24588 427 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 CPOXP36551 454 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 GNL1P36915 607 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-213ENST00000566756 CPA2P48052 419 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 HARS2P49590 506 aaKnown RBP17.17■□□□□ 0.34
CMTM3-213ENST00000566756 ACLYP53396 1101 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 ALDH18A1P54886 795 aaKnown RBP17.17■□□□□ 0.34
CMTM3-213ENST00000566756 AIF1P55008 147 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 IRX1P78414 480 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-213ENST00000566756 KDSRQ06136 332 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 ITGA7Q13683 1181 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 RCN2Q14257 317 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 TWF2Q6IBS0 349 aaKnown RBP17.17■□□□□ 0.34
CMTM3-213ENST00000566756 CASC4Q6P4E1 433 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 RIPOR1Q6ZS17 1223 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 P2RY11Q96G91 374 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 PANX3Q96QZ0 392 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 MARCOQ9UEW3 520 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-213ENST00000566756 SLC7A8Q9UHI5 535 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 DNAJC16Q9Y2G8 782 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 MFSD11O43934 449 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 LCP1P13796 627 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 ANPEPP15144 967 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 MX2P20592 715 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 MGAT1P26572 445 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 NOS2P35228 1153 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 ZNF784Q8NCA9 323 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-213ENST00000566756 OR6Y1Q8NGX8 325 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 RNF139Q8WU17 664 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 LRRN4Q8WUT4 740 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 TNIP3Q96KP6 325 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 ZNF778Q96MU6 729 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 NR1H4Q96RI1 486 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-213ENST00000566756 SLC9A7Q96T83 725 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 EBF4Q9BQW3 602 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 THTPAQ9BU02 230 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 SNX25Q9H3E2 840 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 KRT82Q9NSB4 513 aa17.17■□□□□ 0.34
CMTM3-213ENST00000566756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms