RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SLC6A3Q01959 620 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 PTPN20Q4JDL3 420 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 SLC26A9Q7LBE3 791 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 ZNF397Q8NF99 534 aaPredicted RBP20.83■□□□□ 0.93
CLN6-207ENST00000566347 C1orf216Q8TAB5 229 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 PDCL3Q9H2J4 239 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 PABPC3Q9H361 631 aaKnown RBP20.83■□□□□ 0.93
CLN6-207ENST00000566347 MTG2Q9H4K7 406 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 RRN3Q9NYV6 651 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 COX16Q9P0S2 106 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 WASF3Q9UPY6 502 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 USP24Q9UPU5 2620 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 A0A1B0GVM2 712 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 TCAF2A6NFQ2 919 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 PES1O00541 588 aaKnown RBP20.82■□□□□ 0.92
CLN6-207ENST00000566347 CER1O95813 267 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 NOS2P35228 1153 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 RDXP35241 583 aaKnown RBP20.82■□□□□ 0.92
CLN6-207ENST00000566347 AFF3P51826 1226 aaKnown RBP20.82■□□□□ 0.92
CLN6-207ENST00000566347 SULT2A1Q06520 285 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 RAPGEF1Q13905 1077 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 KCNJ12Q14500 433 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 HSP90AA4PQ58FG1 418 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 C9orf64Q5T6V5 341 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 DHX40Q8IX18 779 aaKnown RBP20.82■□□□□ 0.92
CLN6-207ENST00000566347 CCAR2Q8N163 923 aaKnown RBP20.82■□□□□ 0.92
CLN6-207ENST00000566347 TMEM35BQ8NCS4 154 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 GANCQ8TET4 914 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 PPP1R9BQ96SB3 815 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 OSGEPQ9NPF4 335 aa20.82■□□□□ 0.92
CLN6-207ENST00000566347 SPAARA0A1B0GVQ0 90 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 TRIM16O95361 564 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 ZNF883P0CG24 379 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 PNMA6AP0CW24 399 aaPredicted RBP20.81■□□□□ 0.92
CLN6-207ENST00000566347 EEF1GP26641 437 aaKnown RBP20.81■□□□□ 0.92
CLN6-207ENST00000566347 NNMTP40261 264 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 MATKP42679 507 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 CTSOP43234 321 aaPredicted RBP20.81■□□□□ 0.92
CLN6-207ENST00000566347 NME3Q13232 169 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 DRAP1Q14919 205 aaPredicted RBP20.81■□□□□ 0.92
CLN6-207ENST00000566347 TEAD4Q15561 434 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 CST6Q15828 149 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 KLHDC7AQ5VTJ3 777 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 DPY19L2P1Q6NXN4 242 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 CLEC17AQ6ZS10 378 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 APCDD1Q8J025 514 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 RPRD1AQ96P16 312 aaPredicted RBP20.81■□□□□ 0.92
CLN6-207ENST00000566347 TMEM51Q9NW97 253 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 FBXL12Q9NXK8 326 aa20.81■□□□□ 0.92
CLN6-207ENST00000566347 TTC34A8MYJ7 566 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 SH3BP5O60239 455 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 PDGFRAP16234 1089 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 CDH5P33151 784 aaPredicted RBP20.8■□□□□ 0.92
CLN6-207ENST00000566347 ANP32AP39687 249 aaKnown RBP20.8■□□□□ 0.92
CLN6-207ENST00000566347 PLK1P53350 603 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 KCNMA1Q12791 1236 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 AUHQ13825 339 aaKnown RBP20.8■□□□□ 0.92
CLN6-207ENST00000566347 TCP11X2Q5H9J9 407 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 FBXL22Q6P050 247 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 NAXDQ8IW45 347 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 BIRC7Q96CA5 298 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 SCNM1Q9BWG6 230 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 ADAM33Q9BZ11 813 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 GAREM1Q9H706 876 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 PLCB1Q9NQ66 1216 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 SAMSN1Q9NSI8 373 aaKnown RBP20.8■□□□□ 0.92
CLN6-207ENST00000566347 SLCO3A1Q9UIG8 710 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 STAP1Q9ULZ2 295 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 PCDHB9Q9Y5E1 797 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 FHOD1Q9Y613 1164 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 FRYQ5TBA9 3013 aa20.8■□□□□ 0.92
CLN6-207ENST00000566347 M0QYT0 321 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 MID1O15344 667 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 FSBPO95073 299 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 UCHL3P15374 230 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 CYP11B1P15538 503 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 CD27P26842 260 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 SCNN1AP37088 669 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 GRIA4P48058 902 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 ZNF423Q2M1K9 1284 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 HLA-BQ31612 363 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 LRSAM1Q6UWE0 723 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 CIR1Q86X95 450 aaPredicted RBP20.79■□□□□ 0.92
CLN6-207ENST00000566347 MMAAQ8IVH4 418 aaKnown RBP20.79■□□□□ 0.92
CLN6-207ENST00000566347 RPL10LQ96L21 214 aaKnown RBP20.79■□□□□ 0.92
CLN6-207ENST00000566347 OMDQ99983 421 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 NAA15Q9BXJ9 866 aaKnown RBP20.79■□□□□ 0.92
CLN6-207ENST00000566347 TM9SF3Q9HD45 589 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.79■□□□□ 0.92
CLN6-207ENST00000566347 ADAMTS1Q9UHI8 967 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 FZD4Q9ULV1 537 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 PAXBP1Q9Y5B6 917 aa20.79■□□□□ 0.92
CLN6-207ENST00000566347 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.78■□□□□ 0.92
CLN6-207ENST00000566347 A0A1B0GVT2 93 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 LSM8O95777 96 aaKnown RBP20.78■□□□□ 0.92
CLN6-207ENST00000566347 ADH1BP00325 375 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 PROS1P07225 676 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 SPINK2P20155 84 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 MZF1P28698 734 aaPredicted RBP20.78■□□□□ 0.92
CLN6-207ENST00000566347 GABRB2P47870 512 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms