RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TFAP2DQ7Z6R9 452 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 KIAA0907Q7Z7F0 614 aaPredicted RBP8.41□□□□□ -1.06
CDH13-208ENST00000566333 DAAM2Q86T65 1068 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 NT5DC3Q86UY8 548 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 MFN1Q8IWA4 741 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 CCDC105Q8IYK2 499 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 RNF10Q8N5U6 811 aaKnown RBP8.41□□□□□ -1.06
CDH13-208ENST00000566333 NPWQ8N729 165 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 NAT16Q8N8M0 369 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 PJA1Q8NG27 643 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 RAPGEF5Q92565 580 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 ALG3Q92685 438 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 FAF2Q96CS3 445 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 TMA16Q96EY4 203 aaKnown RBP8.41□□□□□ -1.06
CDH13-208ENST00000566333 CALR3Q96L12 384 aaKnown RBP8.41□□□□□ -1.06
CDH13-208ENST00000566333 CSPG4P5Q96PW8 444 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 EPAS1Q99814 870 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 P2RY13Q9BPV8 354 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 FOXQ1Q9C009 403 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 KLC2Q9H0B6 622 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 NOL6Q9H6R4 1146 aaKnown RBP8.41□□□□□ -1.06
CDH13-208ENST00000566333 ARHGEF4Q9NR80 690 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 TMEM248Q9NWD8 314 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 CWC15Q9P013 229 aaKnown RBP8.41□□□□□ -1.06
CDH13-208ENST00000566333 STIM2Q9P246 746 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 INTS6Q9UL03 887 aaKnown RBP8.41□□□□□ -1.06
CDH13-208ENST00000566333 HCN2Q9UL51 889 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 GUCA1BQ9UMX6 200 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 TBC1D30Q9Y2I9 924 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 SLC27A6Q9Y2P4 619 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 MTF2Q9Y483 593 aaPredicted RBP8.41□□□□□ -1.06
CDH13-208ENST00000566333 MFHAS1Q9Y4C4 1052 aa8.41□□□□□ -1.06
CDH13-208ENST00000566333 SPAG17Q6Q759 2223 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 KANSL1LA0AUZ9 987 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 TYW5A2RUC4 315 aaKnown RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 TMEM221A6NGB7 291 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 WASH4PA8MWX3 477 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 PRRT4C9JH25 899 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 M0R296 226 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 DCLK1O15075 740 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 CREB3O43889 395 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 SRGAP2O75044 1071 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 CLDN11O75508 207 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 KAT7O95251 611 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 FTCDO95954 541 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 EGFP01133 1207 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 KRT1P04264 644 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 KRT7P08729 469 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 ALADP13716 330 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 RHOQP17081 205 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 CTNNA2P26232 953 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 EPHB2P29323 1055 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 HTR7P34969 479 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 SSR1P43307 286 aaKnown RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 VASPP50552 380 aaPredicted RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 GALK1P51570 392 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 CDH4P55283 916 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 CDH6P55285 790 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 TPI1P60174 286 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 MMRN1Q13201 1228 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 CDH18Q13634 790 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 TAZQ16635 292 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 HADHQ16836 314 aaKnown RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 BOLA3Q53S33 107 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 PPP6R3Q5H9R7 873 aaPredicted RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 DCAF12L1Q5VU92 463 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 GRAMD4Q6IC98 578 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 C1orf228Q6PIY5 440 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 ZNF852Q6ZMS4 543 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 Q6ZS52 159 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 ADIPOR2Q86V24 386 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 SUGP1Q8IWZ8 645 aaKnown RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 RHOT1Q8IXI2 618 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 CARNMT1Q8N4J0 409 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 RTL3Q8N8U3 475 aaKnown RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 FIBINQ8TAL6 211 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 FAM3CQ92520 227 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 ALG14Q96F25 216 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 XPO6Q96QU8 1125 aaKnown RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 PNKPQ96T60 521 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 ZNF670Q9BS34 389 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 SLC2A11Q9BYW1 496 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 ZYG11BQ9C0D3 744 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 EPHX3Q9H6B9 360 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 RBM12Q9NTZ6 932 aaKnown RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 ABCB8Q9NUT2 735 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 ETNK2Q9NVF9 386 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 RCOR3Q9P2K3 495 aaPredicted RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 DEC1Q9P2X7 70 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 GGA2Q9UJY4 613 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 NDRG2Q9UN36 371 aaKnown RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 PACSIN2Q9UNF0 486 aaPredicted RBP8.4□□□□□ -1.06
CDH13-208ENST00000566333 OR51B4Q9Y5P0 310 aa8.4□□□□□ -1.06
CDH13-208ENST00000566333 A0A0A0MRY4 1105 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 A0A0D9SEW6 157 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 ZNF487B1APH4 448 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 H3BRJ5 948 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 K7EQS6 105 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 EEF2KO00418 725 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms