RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 PROS1P07225 676 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 SRPRAP08240 638 aaKnown RBP18.92■□□□□ 0.62
USB1-213ENST00000566292 PRKCSHP14314 528 aaPredicted RBP18.92■□□□□ 0.62
USB1-213ENST00000566292 NUMBP49757 651 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 VWA3BQ502W6 1294 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 OR6B2Q6IFH4 312 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 UNQ6494/PRO21346Q6UXR6 183 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 C11orf57Q6ZUT1 292 aaPredicted RBP18.92■□□□□ 0.62
USB1-213ENST00000566292 NAXDQ8IW45 347 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 FAM114A1Q8IWE2 563 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 FAM71AQ8IYT1 594 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 CCAR2Q8N163 923 aaKnown RBP18.92■□□□□ 0.62
USB1-213ENST00000566292 BIRC7Q96CA5 298 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 TUBGCP2Q9BSJ2 902 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 PABPC3Q9H361 631 aaKnown RBP18.92■□□□□ 0.62
USB1-213ENST00000566292 GAREM1Q9H706 876 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 SGK2Q9HBY8 427 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 SERGEFQ9UGK8 458 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 SLC12A6Q9UHW9 1150 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 SLCO3A1Q9UIG8 710 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 A0A1B0GVT2 93 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 MID1O15344 667 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 DAB1O75553 588 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 SLC2A3P11169 496 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 ABCB4P21439 1286 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 ERCC5P28715 1186 aaPredicted RBP18.91■□□□□ 0.62
USB1-213ENST00000566292 CCR1P32246 355 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 KRT9P35527 623 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 MATKP42679 507 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 CSNK1EP49674 416 aaKnown RBP18.91■□□□□ 0.62
USB1-213ENST00000566292 STK19P49842 368 aaPredicted RBP18.91■□□□□ 0.62
USB1-213ENST00000566292 ECT2LQ008S8 904 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 KCNMA1Q12791 1236 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 HNRNPDQ14103 355 aaKnown RBP18.91■□□□□ 0.62
USB1-213ENST00000566292 OTUD1Q5VV17 481 aaPredicted RBP18.91■□□□□ 0.62
USB1-213ENST00000566292 FBXL22Q6P050 247 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 USP30Q70CQ3 517 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 SLC26A9Q7LBE3 791 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 GATA6Q92908 595 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 RPL10LQ96L21 214 aaKnown RBP18.91■□□□□ 0.62
USB1-213ENST00000566292 NOX5Q96PH1 765 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 FAM129BQ96TA1 746 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 ORAI3Q9BRQ5 295 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 FBXL12Q9NXK8 326 aa18.91■□□□□ 0.62
USB1-213ENST00000566292 FNDC3AQ9Y2H6 1198 aaKnown RBP18.91■□□□□ 0.62
USB1-213ENST00000566292 EDDM13A0A1B0GTR0 161 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 TARSL2A2RTX5 802 aaKnown RBP18.9■□□□□ 0.62
USB1-213ENST00000566292 FSBPO95073 299 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 CER1O95813 267 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 IGHV4-34P06331 123 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 PDGFRAP16234 1089 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 MZF1P28698 734 aaPredicted RBP18.9■□□□□ 0.62
USB1-213ENST00000566292 IRAK1P51617 712 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 SLC6A3Q01959 620 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 TRIP6Q15654 476 aaKnown RBP18.9■□□□□ 0.62
USB1-213ENST00000566292 CST6Q15828 149 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 HLA-BQ31612 363 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 CXorf57Q6NSI4 855 aaKnown RBP18.9■□□□□ 0.62
USB1-213ENST00000566292 MMAAQ8IVH4 418 aaKnown RBP18.9■□□□□ 0.62
USB1-213ENST00000566292 PTPRN2Q92932 1015 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 RNF34Q969K3 372 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 IGSF8Q969P0 613 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 TM9SF3Q9HD45 589 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 OSGEPQ9NPF4 335 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 KLK13Q9UKR3 277 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 SCML1Q9UN30 329 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 NCKAP1Q9Y2A7 1128 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 CEP83Q9Y592 693 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 FHOD1Q9Y613 1164 aa18.9■□□□□ 0.62
USB1-213ENST00000566292 SPEGQ15772 3267 aa18.89■□□□□ 0.62
USB1-213ENST00000566292 WDFY3Q8IZQ1 3526 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 A0A1B0GVM2 712 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 A0A1W2PP55 124 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 TCAF2A6NFQ2 919 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 RNASEH1O60930 286 aaKnown RBP18.89■□□□□ 0.61
USB1-213ENST00000566292 CBFA2T3O75081 653 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 ZNF883P0CG24 379 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 CD27P26842 260 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 GGCXP38435 758 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 AFF3P51826 1226 aaKnown RBP18.89■□□□□ 0.61
USB1-213ENST00000566292 PLK1P53350 603 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 CENPCQ03188 943 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 NME3Q13232 169 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 SLC12A1Q13621 1099 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 DRAP1Q14919 205 aaPredicted RBP18.89■□□□□ 0.61
USB1-213ENST00000566292 KIF19Q2TAC6 998 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 RABGAP1LQ5R372 815 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 TTC39BQ5VTQ0 682 aaPredicted RBP18.89■□□□□ 0.61
USB1-213ENST00000566292 IL27RAQ6UWB1 636 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 LAYNQ6UX15 382 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 STK40Q8N2I9 435 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 ZNF397Q8NF99 534 aaPredicted RBP18.89■□□□□ 0.61
USB1-213ENST00000566292 OR52K2Q8NGK3 314 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 GANCQ8TET4 914 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 NUP62CLQ9H1M0 184 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 NEUROG2Q9H2A3 272 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 TM7SF3Q9NS93 570 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 SAMSN1Q9NSI8 373 aaKnown RBP18.89■□□□□ 0.61
USB1-213ENST00000566292 NEUROG3Q9Y4Z2 214 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 SNX11Q9Y5W9 270 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms