RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 CALCOCO1Q9P1Z2 691 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 CPSF2Q9P2I0 782 aaKnown RBP11.03□□□□□ -0.64
UBFD1-205ENST00000566136 TMPRSS11EQ9UL52 423 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 FZD1Q9UP38 647 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 PCDHA1Q9Y5I3 950 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 CLRN2A0PK11 232 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 H0Y8X5 98 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 NKRFO15226 690 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBFD1-205ENST00000566136 AMY2AP04746 511 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 SCG5P05408 212 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 AMY2BP19961 511 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 ARL3P36405 182 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 KLK7P49862 253 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 EPHB4P54760 987 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 ATPAF1Q5TC12 328 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-205ENST00000566136 C11orf88Q6PI97 169 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 OLFML1Q6UWY5 402 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 KRT73Q86Y46 540 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 APOBEC3FQ8IUX4 373 aaKnown RBP11.03□□□□□ -0.64
UBFD1-205ENST00000566136 SYCP3Q8IZU3 236 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 MB21D1Q8N884 522 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 PRMT6Q96LA8 375 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-205ENST00000566136 PTCHD1Q96NR3 888 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 CHP1Q99653 195 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 GRIP2Q9C0E4 1043 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 CUEDC2Q9H467 287 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 PDE11AQ9HCR9 933 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 MID1IP1Q9NPA3 183 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 RNF186Q9NXI6 227 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 TBC1D7Q9P0N9 293 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 ARHGAP20Q9P2F6 1191 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 TTC26A0AVF1 554 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 DDTLA6NHG4 134 aaPredicted RBP11.02□□□□□ -0.64
UBFD1-205ENST00000566136 MYMKA6NI61 221 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 DNPH1O43598 174 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 VAV1P15498 845 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 CTSOP43234 321 aaPredicted RBP11.02□□□□□ -0.64
UBFD1-205ENST00000566136 PITPNBP48739 271 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 BCAR1P56945 870 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 ERMARDQ5T6L9 678 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 MFSD5Q6N075 450 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 HHIPL2Q6UWX4 724 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 SYT13Q7L8C5 426 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 KIAA0895Q8NCT3 520 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 P2RX5Q93086 422 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 CCDC51Q96ER9 411 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 ADAD1Q96M93 576 aaKnown RBP11.02□□□□□ -0.64
UBFD1-205ENST00000566136 ERP44Q9BS26 406 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 NUCKS1Q9H1E3 243 aaKnown RBP11.02□□□□□ -0.64
UBFD1-205ENST00000566136 ZNF446Q9NWS9 450 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 AURKCQ9UQB9 309 aa11.02□□□□□ -0.64
UBFD1-205ENST00000566136 SCDO00767 359 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 PPEF2O14830 753 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 ADAMTS4O75173 837 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 LAMP2P13473 410 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 NF2P35240 595 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 SNAP25P60880 206 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 COG7P83436 770 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 SGO2Q562F6 1265 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 ZNF569Q5MCW4 686 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 OTOP1Q7RTM1 612 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 TMEM110Q86TL2 294 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 MCATQ8IVS2 390 aaKnown RBP11.02□□□□□ -0.65
UBFD1-205ENST00000566136 DHTKD1Q96HY7 919 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-205ENST00000566136 FEM1CQ96JP0 617 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 SNX22Q96L94 193 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 CNOT6LQ96LI5 555 aaKnown RBP11.02□□□□□ -0.65
UBFD1-205ENST00000566136 SPATA13Q96N96 652 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 REEP2Q9BRK0 252 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 ISCUQ9H1K1 167 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 DEFB129Q9H1M3 183 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 MAGEF1Q9HAY2 307 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 GLRX2Q9NS18 164 aa11.02□□□□□ -0.65
UBFD1-205ENST00000566136 MYH7BA7E2Y1 1941 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 PHF2O75151 1096 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 PEX11AO75192 247 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 DDHD2O94830 711 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 TFRCP02786 760 aaKnown RBP11.01□□□□□ -0.65
UBFD1-205ENST00000566136 CLEC3BP05452 202 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 QDPRP09417 244 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 IFNGR1P15260 489 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 H2AFXP16104 143 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-205ENST00000566136 CCNA2P20248 432 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 CCNE1P24864 410 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 FKBP1AP62942 108 aaKnown RBP11.01□□□□□ -0.65
UBFD1-205ENST00000566136 TEX35Q5T0J7 233 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 RABEPKQ7Z6M1 372 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 PPP1R3BQ86XI6 285 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 PCSK9Q8NBP7 692 aaKnown RBP11.01□□□□□ -0.65
UBFD1-205ENST00000566136 ZNF507Q8TCN5 953 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 KCNE4Q8WWG9 221 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 PRRX2Q99811 253 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 TUBGCP2Q9BSJ2 902 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 COLEC11Q9BWP8 271 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 INTS2Q9H0H0 1204 aaKnown RBP11.01□□□□□ -0.65
UBFD1-205ENST00000566136 VEZTQ9HBM0 779 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 OGFRQ9NZT2 677 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 CACNG4Q9UBN1 327 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 KLHL20Q9Y2M5 609 aa11.01□□□□□ -0.65
UBFD1-205ENST00000566136 TRPV2Q9Y5S1 764 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms