RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 KDSRQ06136 332 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 CDH18Q13634 790 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 PREPLQ4J6C6 727 aaPredicted RBP17.14■□□□□ 0.33
RNF40-207ENST00000565931 CXorf57Q6NSI4 855 aaKnown RBP17.14■□□□□ 0.33
RNF40-207ENST00000565931 TFAP2DQ7Z6R9 452 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 KIAA0907Q7Z7F0 614 aaPredicted RBP17.14■□□□□ 0.33
RNF40-207ENST00000565931 NT5DC3Q86UY8 548 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 CCDC117Q8IWD4 279 aaPredicted RBP17.14■□□□□ 0.33
RNF40-207ENST00000565931 RAPGEF5Q92565 580 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 TSC1Q92574 1164 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 EZH1Q92800 747 aaPredicted RBP17.14■□□□□ 0.33
RNF40-207ENST00000565931 NELL2Q99435 816 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 KLHL11Q9NVR0 708 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 TMEM248Q9NWD8 314 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 TRMT1Q9NXH9 659 aaKnown RBP17.14■□□□□ 0.33
RNF40-207ENST00000565931 KIAA1522Q9P206 1035 aaPredicted RBP17.14■□□□□ 0.33
RNF40-207ENST00000565931 TBC1D30Q9Y2I9 924 aa17.14■□□□□ 0.33
RNF40-207ENST00000565931 PDGFBP01127 241 aaPredicted RBP17.13■□□□□ 0.33
RNF40-207ENST00000565931 APODP05090 189 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 CD48P09326 243 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 DRD1P21728 446 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 CTNNA2P26232 953 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 CD70P32970 193 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 ARL4AP40617 200 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 GRSF1Q12849 480 aaKnown RBP eCLIP17.13■□□□□ 0.33
RNF40-207ENST00000565931 LMAN2Q12907 356 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 KRT81Q14533 505 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 PDK2Q15119 407 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 GEN1Q17RS7 908 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 RFX8Q6ZV50 586 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 SFTPA1Q8IWL2 248 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 RTL3Q8N8U3 475 aaKnown RBP17.13■□□□□ 0.33
RNF40-207ENST00000565931 TERB1Q8NA31 727 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 KCTD6Q8NC69 237 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 OR52K2Q8NGK3 314 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 KRT35Q92764 455 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 CSPG4P5Q96PW8 444 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 FOXQ1Q9C009 403 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 CATSPERBQ9H7T0 1116 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 ABCB8Q9NUT2 735 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 DDX56Q9NY93 547 aaKnown RBP17.13■□□□□ 0.33
RNF40-207ENST00000565931 RCOR3Q9P2K3 495 aaPredicted RBP17.13■□□□□ 0.33
RNF40-207ENST00000565931 AMFRQ9UKV5 643 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 NDRG2Q9UN36 371 aaKnown RBP17.13■□□□□ 0.33
RNF40-207ENST00000565931 MTF2Q9Y483 593 aaPredicted RBP17.13■□□□□ 0.33
RNF40-207ENST00000565931 COL4A3Q01955 1670 aa17.13■□□□□ 0.33
RNF40-207ENST00000565931 TBC1D3BA6NDS4 549 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 FAM170BA6NMN3 283 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 PRRT4C9JH25 899 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 FGF10O15520 208 aaPredicted RBP17.12■□□□□ 0.33
RNF40-207ENST00000565931 DAPK3O43293 454 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 FTCDO95954 541 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 EGFP01133 1207 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 CHRNB1P11230 501 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 PABPC1P11940 636 aaKnown RBP17.12■□□□□ 0.33
RNF40-207ENST00000565931 ERCC2P18074 760 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 KDELR1P24390 212 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 OR1E1P30953 314 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 CTNNA1P35221 906 aaKnown RBP17.12■□□□□ 0.33
RNF40-207ENST00000565931 MARCKSL1P49006 195 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 MAPKAPK2P49137 400 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 OXCT1P55809 520 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 MMRN1Q13201 1228 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 FZD5Q13467 585 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 DPYSQ14117 519 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 DPYSL3Q14195 570 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 UBXN2BQ14CS0 331 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 ZFYVE27Q5T4F4 411 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 PEX26Q7Z412 305 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 SETD3Q86TU7 594 aaPredicted RBP17.12■□□□□ 0.33
RNF40-207ENST00000565931 MAP7D3Q8IWC1 876 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 WFIKKN2Q8TEU8 576 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 ALG14Q96F25 216 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 OSBPL6Q9BZF3 934 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 NDFIP2Q9NV92 336 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 GGA2Q9UJY4 613 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 INTS6Q9UL03 887 aaKnown RBP17.12■□□□□ 0.33
RNF40-207ENST00000565931 PCDHA3Q9Y5H8 950 aa17.12■□□□□ 0.33
RNF40-207ENST00000565931 CCDC66A2RUB6 948 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 LRRD1A4D1F6 860 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 C3orf70A6NLC5 250 aaPredicted RBP17.11■□□□□ 0.33
RNF40-207ENST00000565931 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 K7EQS6 105 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 STK25O00506 426 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 KRT1P04264 644 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 RHOCP08134 193 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 AMPD1P23109 780 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 MZF1P28698 734 aaPredicted RBP17.11■□□□□ 0.33
RNF40-207ENST00000565931 CSKP41240 450 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 TNFRSF4P43489 277 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 PEX5P50542 639 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 PLK1P53350 603 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 SLC12A1Q13621 1099 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 CCINQ13939 588 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 C6orf118Q5T5N4 469 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 TMEM215Q68D42 235 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 CWF19L1Q69YN2 538 aaKnown RBP17.11■□□□□ 0.33
RNF40-207ENST00000565931 ANKS1BQ7Z6G8 1248 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 ADIPOR2Q86V24 386 aa17.11■□□□□ 0.33
RNF40-207ENST00000565931 KATNAL2Q8IYT4 538 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms