RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TFAP2DQ7Z6R9 452 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 GPR149Q86SP6 731 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 NETO2Q8NC67 525 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 SH3RF2Q8TEC5 729 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 TFB1MQ8WVM0 346 aaKnown RBP19.27■□□□□ 0.68
COMMD4-213ENST00000565834 MYEOVQ96EZ4 313 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 TRIM31Q9BZY9 425 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 GDF3Q9NR23 364 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 TDP1Q9NUW8 608 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 RAB21Q9UL25 225 aa19.27■□□□□ 0.68
COMMD4-213ENST00000565834 SCAMP3O14828 347 aaKnown RBP19.27■□□□□ 0.67
COMMD4-213ENST00000565834 IFNB1P01574 187 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 KRT14P02533 472 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 HOXB8P17481 243 aaPredicted RBP19.27■□□□□ 0.67
COMMD4-213ENST00000565834 STIP1P31948 543 aaKnown RBP19.27■□□□□ 0.67
COMMD4-213ENST00000565834 ADAM15Q13444 863 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 DUPD1Q68J44 220 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 SYCE2Q6PIF2 218 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 CCDC89Q8N998 374 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 CCHCR1Q8TD31 782 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 USP13Q92995 863 aaPredicted RBP19.27■□□□□ 0.67
COMMD4-213ENST00000565834 CELF6Q96J87 481 aaKnown RBP19.27■□□□□ 0.67
COMMD4-213ENST00000565834 KLC2Q9H0B6 622 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 DPH5Q9H2P9 285 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 ASIC3Q9UHC3 531 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 CCL26Q9Y258 94 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 NEU2Q9Y3R4 380 aa19.27■□□□□ 0.67
COMMD4-213ENST00000565834 BHMG1C9JSJ3 638 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-213ENST00000565834 DYNC1I1O14576 645 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 TRDMT1O14717 391 aaKnown RBP19.26■□□□□ 0.67
COMMD4-213ENST00000565834 FSHRP23945 695 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 RBL1P28749 1068 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 GDF10P55107 478 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 GALNT2Q10471 571 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 TRIP13Q15645 432 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-213ENST00000565834 CIR1Q86X95 450 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-213ENST00000565834 TP53INP2Q8IXH6 220 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 FAM71DQ8N9W8 422 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 CCNYQ8ND76 341 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 LRRN4Q8WUT4 740 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 CASKIN2Q8WXE0 1202 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 SEC14L1Q92503 715 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 ZSWIM3Q96MP5 696 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 PRICKLE1Q96MT3 831 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-213ENST00000565834 LGMNQ99538 433 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 RETREG1Q9H6L5 497 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 PCDH9Q9HC56 1237 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 NDFIP2Q9NV92 336 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 MTCH2Q9Y6C9 303 aa19.26■□□□□ 0.67
COMMD4-213ENST00000565834 ZFP37Q9Y6Q3 630 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-213ENST00000565834 E2F8A0AVK6 867 aa19.25■□□□□ 0.67
COMMD4-213ENST00000565834 KCNN4O15554 427 aa19.25■□□□□ 0.67
COMMD4-213ENST00000565834 PRAMEF12O95522 483 aa19.25■□□□□ 0.67
COMMD4-213ENST00000565834 AP1B1Q10567 949 aa19.25■□□□□ 0.67
COMMD4-213ENST00000565834 CBX2Q14781 532 aaPredicted RBP19.25■□□□□ 0.67
COMMD4-213ENST00000565834 PRKD1Q15139 912 aaPredicted RBP19.25■□□□□ 0.67
COMMD4-213ENST00000565834 TTC39BQ5VTQ0 682 aaPredicted RBP19.25■□□□□ 0.67
COMMD4-213ENST00000565834 HEATR6Q6AI08 1181 aaKnown RBP19.25■□□□□ 0.67
COMMD4-213ENST00000565834 CFAP52Q8N1V2 620 aa19.25■□□□□ 0.67
COMMD4-213ENST00000565834 FERMT1Q9BQL6 677 aa19.25■□□□□ 0.67
COMMD4-213ENST00000565834 BRD8Q9H0E9 1235 aa19.25■□□□□ 0.67
COMMD4-213ENST00000565834 USP29Q9HBJ7 922 aa19.25■□□□□ 0.67
COMMD4-213ENST00000565834 FAM114A2Q9NRY5 505 aa19.25■□□□□ 0.67
COMMD4-213ENST00000565834 NYNRINQ9P2P1 1898 aaKnown RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 DFFAO00273 331 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 TSPAN3O60637 253 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 ZNF189O75820 626 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 ETS1P14921 441 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 TNFRSF8P28908 595 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 GARSP41250 739 aaKnown RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 MAPKAPK2P49137 400 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 VPS41P49754 854 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 CDH4P55283 916 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 RPS24P62847 133 aaKnown RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 CUL1Q13616 776 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 AFMIDQ63HM1 303 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 PRUNE1Q86TP1 453 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 ARID3BQ8IVW6 561 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 ARHGAP12Q8IWW6 846 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 BBS7Q8IWZ6 715 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 FAM217AQ8IXS0 508 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 UMODL1-AS1Q8N2C9 162 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 GLIS1Q8NBF1 620 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 IFT81Q8WYA0 676 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 HDAC11Q96DB2 347 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 ZNF212Q9UDV6 495 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 SNX24Q9Y343 169 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 REV3LO60673 3130 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 TYW5A2RUC4 315 aaKnown RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 ZSCAN5DPP0CG00 497 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 OR1E1P30953 314 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 ADCY8P40145 1251 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 RPL21P46778 160 aaKnown RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 NDST2P52849 883 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 DRG2P55039 364 aaKnown RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 PPIDQ08752 370 aaKnown RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 TRADDQ15628 312 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 CPXM2Q8N436 756 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 ATPAF2Q8N5M1 289 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 HJURPQ8NCD3 748 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms