RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TRIM5Q9C035 493 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 TSPY26PQ9H489 355 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 CD209Q9NNX6 404 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 RRN3Q9NYV6 651 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 ZNF70Q9UC06 446 aaPredicted RBP4.65□□□□□ -1.66
LINC00561-201ENST00000565815 ARAP2Q8WZ64 1704 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 A1L4Q6 167 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 HMX3A6NHT5 357 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 KIF28PB7ZC32 967 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 AGR2O95994 175 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 SRGAP2BP0DMP2 458 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 ALADP13716 330 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 SEC24CP53992 1094 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 MXRA7P84157 204 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 EFEMP1Q12805 493 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 BLMHQ13867 455 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 PGBD2Q6P3X8 592 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 B3GALNT2Q8NCR0 500 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 MAFAQ8NHW3 353 aaPredicted RBP4.65□□□□□ -1.67
LINC00561-201ENST00000565815 CYP2W1Q8TAV3 490 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 PROKR1Q8TCW9 393 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 ATRIPQ8WXE1 791 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 PKNOX2Q96KN3 472 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 ARHGAP39Q9C0H5 1083 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.65□□□□□ -1.67
LINC00561-201ENST00000565815 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.65□□□□□ -1.67
LINC00561-201ENST00000565815 DAPP1Q9UN19 280 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 SLC27A6Q9Y2P4 619 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 DLG5Q8TDM6 1919 aa4.65□□□□□ -1.67
LINC00561-201ENST00000565815 DIRC3C9JPN6 131 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 NPIPB8E9PQR5 432 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 AIMP1Q12904 312 aaKnown RBP4.64□□□□□ -1.67
LINC00561-201ENST00000565815 TBCCQ15814 346 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 LRRC24Q50LG9 513 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 FAXCQ5TGI0 409 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 SMAP1Q8IYB5 467 aaPredicted RBP4.64□□□□□ -1.67
LINC00561-201ENST00000565815 IZUMO1Q8IYV9 350 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 BEND2Q8NDZ0 799 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 FAM71BQ8TC56 605 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 OSCP1Q8WVF1 389 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 RFKQ969G6 155 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 SNX27Q96L92 541 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 PRR25Q96S07 402 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 KATNAL1Q9BW62 490 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 GALNT9Q9HCQ5 603 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 TESQ9UGI8 421 aaKnown RBP4.64□□□□□ -1.67
LINC00561-201ENST00000565815 YY2O15391 372 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 CKMT1AP12532 417 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 TYRP1P17643 537 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 PDE1AP54750 535 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 GUCY1B3Q02153 619 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 NEXNQ0ZGT2 675 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 FOXI1Q12951 378 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 CUL4BQ13620 913 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 VGLL4Q14135 290 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 DCTN1Q14203 1278 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 HLXQ14774 488 aaPredicted RBP4.64□□□□□ -1.67
LINC00561-201ENST00000565815 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.64□□□□□ -1.67
LINC00561-201ENST00000565815 AKNAD1Q5T1N1 836 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 ICE2Q659A1 982 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 ZNF627Q7L945 461 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 TSPYL6Q8N831 410 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 C8orf58Q8NAV2 365 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 ZNF503Q96F45 646 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 MPHOSPH8Q99549 860 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 SERHL2Q9H4I8 314 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 VEZTQ9HBM0 779 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 ZNF112Q9UJU3 913 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 DRG1Q9Y295 367 aaKnown RBP4.64□□□□□ -1.67
LINC00561-201ENST00000565815 TSC22D4Q9Y3Q8 395 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 PCDHB7Q9Y5E2 793 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 DGKBQ9Y6T7 804 aa4.64□□□□□ -1.67
LINC00561-201ENST00000565815 PDHXO00330 501 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 ZSCAN9O15535 394 aaPredicted RBP4.63□□□□□ -1.67
LINC00561-201ENST00000565815 CCP110O43303 1012 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 DHHO43323 396 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 DRD1P21728 446 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 CNTFP26441 200 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 ATXN1P54253 815 aaKnown RBP4.63□□□□□ -1.67
LINC00561-201ENST00000565815 FAM3BP58499 235 aaPredicted RBP4.63□□□□□ -1.67
LINC00561-201ENST00000565815 PDCLQ13371 301 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 TUBA3CQ13748 450 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 E2F2Q14209 437 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 MAPKAPK3Q16644 382 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 TIGD2Q4W5G0 525 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 CCDC183Q5T5S1 534 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 LAIR1Q6GTX8 287 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 TUBA3EQ6PEY2 450 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 PIK3AP1Q6ZUJ8 805 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 RHOUQ7L0Q8 258 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 FSTL5Q8N475 847 aaPredicted RBP4.63□□□□□ -1.67
LINC00561-201ENST00000565815 CCDC150Q8NCX0 1101 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 TDRD7Q8NHU6 1098 aaKnown RBP4.63□□□□□ -1.67
LINC00561-201ENST00000565815 GPT2Q8TD30 523 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 MYEOVQ96EZ4 313 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 SCLT1Q96NL6 688 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 HIST1H2AAQ96QV6 131 aa4.63□□□□□ -1.67
LINC00561-201ENST00000565815 THUMPD2Q9BTF0 503 aaKnown RBP4.63□□□□□ -1.67
LINC00561-201ENST00000565815 PARPBPQ9NWS1 579 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms