RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CCAR2Q8N163 923 aaKnown RBP17.27■□□□□ 0.36
USB1-211ENST00000565662 DNASE2BQ8WZ79 361 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 LMLNQ96KR4 655 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 C1orf74Q96LT6 269 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 CCDC114Q96M63 670 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 NPY6RQ99463 290 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 PRMT1Q99873 361 aaKnown RBP17.27■□□□□ 0.36
USB1-211ENST00000565662 BTBD1Q9H0C5 482 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 FAM207AQ9NSI2 230 aaPredicted RBP17.27■□□□□ 0.36
USB1-211ENST00000565662 FANCLQ9NW38 375 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 SLC25A13Q9UJS0 675 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 AJAP1Q9UKB5 411 aaPredicted RBP17.27■□□□□ 0.36
USB1-211ENST00000565662 PI4KAP42356 2102 aa17.27■□□□□ 0.35
USB1-211ENST00000565662 DNAH14Q0VDD8 3507 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.26■□□□□ 0.35
USB1-211ENST00000565662 CXorf51AA0A1B0GTR3 108 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 DCDC2BA2VCK2 349 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 TM4SF5O14894 197 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 ADH1BP00325 375 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 ITPKAP23677 461 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 RDXP35241 583 aaKnown RBP17.26■□□□□ 0.35
USB1-211ENST00000565662 NSFP46459 744 aaKnown RBP17.26■□□□□ 0.35
USB1-211ENST00000565662 CXCR3P49682 368 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 SULT1E1P49888 294 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 JAM2P57087 298 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 UBXN1Q04323 297 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 DEUP1Q05D60 604 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 CCDC15Q0P6D6 951 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 ZNF177Q13360 481 aaPredicted RBP17.26■□□□□ 0.35
USB1-211ENST00000565662 ELAVL3Q14576 367 aaKnown RBP17.26■□□□□ 0.35
USB1-211ENST00000565662 C5orf22Q49AR2 442 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 SETD3Q86TU7 594 aaPredicted RBP17.26■□□□□ 0.35
USB1-211ENST00000565662 XYLT1Q86Y38 959 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 CYB5D2Q8WUJ1 264 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 RSPH9Q9H1X1 276 aaPredicted RBP17.26■□□□□ 0.35
USB1-211ENST00000565662 CAPN10Q9HC96 672 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 OSGEPQ9NPF4 335 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 ARHGEF38Q9NXL2 777 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 FZD4Q9ULV1 537 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 ERVW-1Q9UQF0 538 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 SIK3Q9Y2K2 1263 aa17.26■□□□□ 0.35
USB1-211ENST00000565662 NYNRINQ9P2P1 1898 aaKnown RBP17.25■□□□□ 0.35
USB1-211ENST00000565662 ANKRD62A6NC57 917 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 OPHN1O60890 802 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 GRAP2O75791 330 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 CALB1P05937 261 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 CEACAM1P13688 526 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 ZNF18P17022 549 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 ENGP17813 658 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 ETFBP38117 255 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 TPM4P67936 248 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 KRT83P78385 493 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 IRX4P78413 519 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 TYRO3Q06418 890 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 AUHQ13825 339 aaKnown RBP17.25■□□□□ 0.35
USB1-211ENST00000565662 TAF5Q15542 800 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 TCEAL6Q6IPX3 200 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 ZNF783Q6ZMS7 281 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 NOP9Q86U38 636 aaKnown RBP17.25■□□□□ 0.35
USB1-211ENST00000565662 WFDC5Q8TCV5 224 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 SORCS1Q8WY21 1168 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 TCEAL3Q969E4 200 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 SKA1Q96BD8 255 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 HAPLN3Q96S86 360 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 C2orf49Q9BVC5 232 aaPredicted RBP17.25■□□□□ 0.35
USB1-211ENST00000565662 PRSS16Q9NQE7 514 aa17.25■□□□□ 0.35
USB1-211ENST00000565662 NOCTQ9UK39 431 aaKnown RBP17.25■□□□□ 0.35
USB1-211ENST00000565662 FARP1Q9Y4F1 1045 aaPredicted RBP17.25■□□□□ 0.35
USB1-211ENST00000565662 SYNJ2BP-COX16A0A087WUM0 186 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 C4orf47A7E2U8 309 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 METTL12A8MUP2 240 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 ARHGAP33O14559 1287 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 ALOX15BO15296 676 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 GFPT2O94808 682 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 CER1O95813 267 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 CYP1A1P04798 512 aaPredicted RBP17.24■□□□□ 0.35
USB1-211ENST00000565662 PNMA6AP0CW24 399 aaPredicted RBP17.24■□□□□ 0.35
USB1-211ENST00000565662 HLA-EP13747 358 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 MMP8P22894 467 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 NUDT1P36639 197 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 TEAD4Q15561 434 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 C6orf118Q5T5N4 469 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 TAF3Q5VWG9 929 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 FBXL22Q6P050 247 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 SLC41A1Q8IVJ1 513 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 CFAP52Q8N1V2 620 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 GPR174Q9BXC1 333 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 TKTL2Q9H0I9 626 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 SMOC1Q9H4F8 434 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 COX16Q9P0S2 106 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 TBC1D30Q9Y2I9 924 aa17.24■□□□□ 0.35
USB1-211ENST00000565662 MED19A0JLT2 244 aaPredicted RBP17.23■□□□□ 0.35
USB1-211ENST00000565662 LRRC72A6NJI9 287 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 PAGE1O75459 146 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 SEMA4FO95754 770 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 MMEP08473 750 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 FERP16591 822 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 SDC4P31431 198 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 CLCN6P51797 869 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 RPS14P62263 151 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms