RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-215	ENST00000565442	AOX1	Q06278	1338 aa		4.97	□□□□□ -1.61
CHD9-215	ENST00000565442	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	C3orf70	A6NLC5	250 aa	Predicted RBP	4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	POC1B-GALNT4	F8VUJ3	575 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	UBE2Q2L	H0YL09	131 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	GRM8	O00222	908 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	HNRNPR	O43390	633 aa	Known RBP	4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	WDHD1	O75717	1129 aa	Predicted RBP	4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	PRR35	P0CG20	571 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	ACP5	P13686	325 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	CYP3A7	P24462	503 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	CCKBR	P32239	447 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	KLF9	Q13886	244 aa	Predicted RBP	4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	ANKRD1	Q15327	319 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	PRAMEF17	Q5VTA0	474 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	TMTC1	Q8IUR5	882 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	ADGRF3	Q8IZF5	1079 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	GALNT4	Q8N4A0	578 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	ESX1	Q8N693	406 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	STAM	Q92783	540 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	KCNJ9	Q92806	393 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	WAC	Q9BTA9	647 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	HTATIP2	Q9BUP3	242 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	NUAK2	Q9H093	628 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	ARL8B	Q9NVJ2	186 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	ZNF521	Q96K83	1311 aa		4.96	□□□□□ -1.62
CHD9-215	ENST00000565442	CNP	P09543	421 aa	Known RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	ALDOC	P09972	364 aa	Known RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	LYL1	P12980	280 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	IGFBP2	P18065	325 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	CCT4	P50991	539 aa	Known RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	ZNF84	P51523	738 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	TUBA4A	P68366	448 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	CHRND	Q07001	517 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	CDK18	Q07002	472 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	SLC10A2	Q12908	348 aa	Predicted RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	ETFDH	Q16134	617 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	PFKFB3	Q16875	520 aa	Predicted RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	CERKL	Q49MI3	558 aa	Predicted RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	MAP3K21	Q5TCX8	1036 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	JAKMIP3	Q5VZ66	844 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	SUMO4	Q6EEV6	95 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	TFAP2D	Q7Z6R9	452 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	HEATR4	Q86WZ0	1026 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	ANKRD44	Q8N8A2	993 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	IL17RE	Q8NFR9	667 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	CELF1	Q92879	486 aa	Known RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	RPL36AL	Q969Q0	106 aa	Known RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	ZNF845	Q96IR2	970 aa	Predicted RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	REEP2	Q9BRK0	252 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	TRIM2	Q9C040	744 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	TMEM160	Q9NX00	188 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	MTMR4	Q9NYA4	1195 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	PI4KB	Q9UBF8	816 aa		4.95	□□□□□ -1.62
CHD9-215	ENST00000565442	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.95	□□□□□ -1.62
CHD9-215	ENST00000565442		A0A1B0GVC2	190 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	VWA3A	A6NCI4	1184 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	LINC01548	A6NM66	108 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	RRH	O14718	337 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	KLK10	O43240	276 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	HOXC11	O43248	304 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	RFPL3S	P0C7P2	107 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	CYP2A6	P11509	494 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	IDUA	P35475	653 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	PNPLA4	P41247	253 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	TUB	P50607	506 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	B4GALNT1	Q00973	533 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	TLE2	Q04725	743 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	DMWD	Q09019	674 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	TRPC3	Q13507	836 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	SEC23B	Q15437	767 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	PROSER3	Q2NL68	480 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	SLC4A8	Q2Y0W8	1093 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	RUSC1-AS1	Q66K80	236 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	TMEM88	Q6PEY1	159 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	ADPRHL1	Q8NDY3	354 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	ASB2	Q96Q27	587 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	SENP7	Q9BQF6	1050 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	ABHD14A	Q9BUJ0	271 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	EFHD1	Q9BUP0	239 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	HDHD5	Q9BXW7	423 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	SFXN1	Q9H9B4	322 aa		4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	TLR8	Q9NR97	1041 aa	Known RBP	4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
CHD9-215	ENST00000565442	NPIPB13	A6NJU9	1138 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	NPIPB5	A8MRT5	1133 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	NPIPB4	C9JG80	1138 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	TMEM232	C9JQI7	657 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	CNTN5	O94779	1100 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	NTN1	O95631	604 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	ENO1	P06733	434 aa	Known RBP	4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	CHRM5	P08912	532 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	XBP1	P17861	261 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	CD53	P19397	219 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	KEL	P23276	732 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	PRPH2	P23942	346 aa		4.93	□□□□□ -1.62
CHD9-215	ENST00000565442	FOXG1	P55316	489 aa	Predicted RBP	4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms