RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CD70P32970 193 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 NNMTP40261 264 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 NRLP54845 237 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 ST8SIA6P61647 398 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 LMAN2Q12907 356 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 MESDQ14696 234 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 FSCBQ5H9T9 825 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 C6orf118Q5T5N4 469 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 MBLAC2Q68D91 279 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 RNF43Q68DV7 783 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 SYT13Q7L8C5 426 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 SETD3Q86TU7 594 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-208ENST00000564703 PSTKQ8IV42 348 aaKnown RBP16.45■□□□□ 0.22
RAB40C-208ENST00000564703 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAB40C-208ENST00000564703 NIPA2Q8N8Q9 360 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 IL17RCQ8NAC3 791 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 RFFLQ8WZ73 363 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 TBC1D31Q96DN5 1066 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 DHX35Q9H5Z1 703 aaKnown RBP16.45■□□□□ 0.22
RAB40C-208ENST00000564703 POLMQ9NP87 494 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-208ENST00000564703 DONSONQ9NYP3 566 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 FBXO4Q9UKT5 387 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 MMP17Q9ULZ9 603 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 AP4E1Q9UPM8 1137 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 CACNA1IQ9P0X4 2223 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 LRCH4O75427 683 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 CNTN5O94779 1100 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 LRIG2O94898 1065 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 PROSCO94903 275 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 ASLP04424 464 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 RHOCP08134 193 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 RHOQP17081 205 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 EPHB2P29323 1055 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 ALFQ53S48 1182 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 RNF219Q5W0B1 726 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-208ENST00000564703 TFAP2DQ7Z6R9 452 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 KIAA0907Q7Z7F0 614 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-208ENST00000564703 ZNF683Q8IZ20 524 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 PYROXD2Q8N2H3 581 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 ARFGAP1Q8N6T3 406 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 WFDC5Q8TCV5 224 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 MUC3BQ9H195 1237 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 CATSPERBQ9H7T0 1116 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 ZWILCHQ9H900 591 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 OSGEPQ9NPF4 335 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 THAP10Q9P2Z0 257 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-208ENST00000564703 TBC1D30Q9Y2I9 924 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 MUC3AQ02505 3323 aa16.44■□□□□ 0.22
RAB40C-208ENST00000564703 TMEM110-MUSTN1A8MSY1 372 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 H0Y858 1186 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 SYNCRIPO60506 623 aaKnown RBP16.43■□□□□ 0.22
RAB40C-208ENST00000564703 ALDH1A2O94788 518 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 DLDP09622 509 aaKnown RBP16.43■□□□□ 0.22
RAB40C-208ENST00000564703 COL9A1P20849 921 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 HTR7P34969 479 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 WASP42768 502 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 DGKEP52429 567 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 ZNF135P52742 658 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-208ENST00000564703 PLK1P53350 603 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 NAP1L1P55209 391 aaKnown RBP16.43■□□□□ 0.22
RAB40C-208ENST00000564703 SATB1Q01826 763 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 SULT2A1Q06520 285 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 FNDC3BQ53EP0 1204 aaKnown RBP16.43■□□□□ 0.22
RAB40C-208ENST00000564703 PPP6R3Q5H9R7 873 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-208ENST00000564703 PITRM1Q5JRX3 1037 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 ZFYVE27Q5T4F4 411 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 EGFLAMQ63HQ2 1017 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 PKN3Q6P5Z2 889 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 RAD9BQ6WBX8 426 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 KIAA1328Q86T90 577 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 ADIPOR2Q86V24 386 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 CAMKK1Q8N5S9 505 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 SORCS1Q8WY21 1168 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 TTC17Q96AE7 1141 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 SNRNP25Q9BV90 132 aaKnown RBP16.43■□□□□ 0.22
RAB40C-208ENST00000564703 FAM126AQ9BYI3 521 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-208ENST00000564703 MAGEB5Q9BZ81 275 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 VPS28Q9UK41 221 aa16.43■□□□□ 0.22
RAB40C-208ENST00000564703 KIAA1549LQ6ZVL6 1849 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 FAM72CH0Y354 149 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 SGK1O00141 431 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 EEF2KO00418 725 aaKnown RBP16.42■□□□□ 0.22
RAB40C-208ENST00000564703 ETFBP38117 255 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 ARL4AP40617 200 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 CSKP41240 450 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 PTPN5P54829 565 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 TPI1P60174 286 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 ECT2LQ008S8 904 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 ZNF234Q14588 700 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 STARD3Q14849 445 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 CRY1Q16526 586 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 PLEKHG6Q3KR16 790 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 ZNF528Q3MIS6 628 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 FUT11Q495W5 492 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 FAM72AQ5TYM5 149 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 TMEM215Q68D42 235 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 FAM72DQ6L9T8 149 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 SERPINA13PQ6UXR4 307 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms