RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 METTL3Q86U44 580 aaKnown RBP18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 CIR1Q86X95 450 aaPredicted RBP18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 EMC1Q8N766 993 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 ZNF366Q8N895 744 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 IGSF8Q969P0 613 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 PPP1R9BQ96SB3 815 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 SELENOOQ9BVL4 669 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 MKRN2Q9H000 416 aaKnown RBP18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 CDV3Q9UKY7 258 aaKnown RBP18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 BAHCC1Q9P281 2608 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 MED19A0JLT2 244 aaPredicted RBP18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 KRT3P12035 628 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 GGCXP38435 758 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 COPAP53621 1224 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 ATXN1P54253 815 aaKnown RBP18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 ATP11AP98196 1134 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 CAMK2GQ13555 558 aaPredicted RBP18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 PUM1Q14671 1186 aaKnown RBP eCLIP18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 NR1I3Q14994 352 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 PLEKHG6Q3KR16 790 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 RNF219Q5W0B1 726 aaPredicted RBP18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 TRNP1Q6NT89 227 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 LRRC31Q6UY01 552 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 ARMCX6Q7L4S7 300 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 IRF2BP2Q7Z5L9 587 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 PHF13Q86YI8 300 aaPredicted RBP18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 APCDD1Q8J025 514 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 DEFB119Q8N690 84 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 OR2T3Q8NH03 318 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 RXFP2Q8WXD0 754 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 BAP1Q92560 729 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 PIGKQ92643 395 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 SMOC1Q9H4F8 434 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 ITM2CQ9NQX7 267 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 ERVW-1Q9UQF0 538 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 WDR87Q6ZQQ6 2873 aa18.92■□□□□ 0.62
SYNGR3-204ENST00000564642 MUC22E2RYF6 1773 aaPredicted RBP18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 LRRC53A6NM62 1247 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 SRPRAP08240 638 aaKnown RBP18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 SDC4P31431 198 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 FANCCQ00597 558 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 ECT2LQ008S8 904 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 PTP4A2Q12974 167 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 ASIC2Q16515 512 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 SFMBT2Q5VUG0 894 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 LYSMD4Q5XG99 296 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 C14orf80Q86SX3 495 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 C1orf74Q96LT6 269 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 FBRSQ9HAH7 460 aa18.91■□□□□ 0.62
SYNGR3-204ENST00000564642 KHNYNO15037 678 aaKnown RBP18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 CLDN11O75508 207 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 CD6P30203 668 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 OXTRP30559 389 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 NNMTP40261 264 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 DPP6P42658 865 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 PTGER3P43115 390 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 CDH4P55283 916 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 GSCP56915 257 aaPredicted RBP18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 UBASH3AP57075 661 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 SULT2A1Q06520 285 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 C1QBPQ07021 282 aaKnown RBP18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 CDO1Q16878 200 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 CCDC14Q49A88 953 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 C5orf22Q49AR2 442 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 ACAD10Q6JQN1 1059 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 PPP1R2P3Q6NXS1 205 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 BNIPLQ7Z465 357 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 FAM131BQ86XD5 332 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 CACUL1Q86Y37 369 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 KDM1BQ8NB78 822 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 JOSD2Q8TAC2 188 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 NETO1Q8TDF5 533 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 HAPLN3Q96S86 360 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 EDEM3Q9BZQ6 932 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 CD93Q9NPY3 652 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 PRSS16Q9NQE7 514 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 ANLNQ9NQW6 1124 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 DLL3Q9NYJ7 618 aa18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 USP36Q9P275 1121 aaKnown RBP18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 TNRC6BQ9UPQ9 1833 aaKnown RBP18.9■□□□□ 0.62
SYNGR3-204ENST00000564642 C2CD4BA6NLJ0 364 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 GDF9O60383 454 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 ENDOD1O94919 500 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 GJB6O95452 261 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 MZF1P28698 734 aaPredicted RBP18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 CTSOP43234 321 aaPredicted RBP18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 TPMTP51580 245 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 PLK1P53350 603 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 ZNF33AQ06730 810 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 C15orf59Q2T9L4 293 aaPredicted RBP18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 ARL13BQ3SXY8 428 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 CXorf57Q6NSI4 855 aaKnown RBP18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 MON1BQ7L1V2 547 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 SYT12Q8IV01 421 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 C3orf20Q8ND61 904 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 MYO19Q96H55 970 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 RPL10LQ96L21 214 aaKnown RBP18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 MRGPRX3Q96LB0 322 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 NUP58Q9BVL2 599 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms