RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PQLC3Q8N755 202 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 RIN3Q8TB24 985 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 EDAQ92838 391 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 PBXIP1Q96AQ6 731 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 OTUB2Q96DC9 234 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 RPRD1AQ96P16 312 aaPredicted RBP13.3□□□□□ -0.28
SPG7-209ENST00000564047 ZYG11BQ9C0D3 744 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 CATSPERBQ9H7T0 1116 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 DONSONQ9NYP3 566 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 DENND4CQ5VZ89 1909 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 C2orf16Q68DN1 1984 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 PDE2AO00408 941 aaPredicted RBP13.29□□□□□ -0.28
SPG7-209ENST00000564047 DCLK1O15075 740 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 MBTPS2O43462 519 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 RHOQP17081 205 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 TGM2P21980 687 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 FCARP24071 287 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 VIPR2P41587 438 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 PAFAH1B3Q15102 231 aaKnown RBP13.29□□□□□ -0.28
SPG7-209ENST00000564047 SMAD2Q15796 467 aaKnown RBP13.29□□□□□ -0.28
SPG7-209ENST00000564047 IER5LQ5T953 404 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 TTC39BQ5VTQ0 682 aaPredicted RBP13.29□□□□□ -0.28
SPG7-209ENST00000564047 NCBP2-AS2Q69YL0 99 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 RWDD4Q6NW29 188 aaKnown RBP13.29□□□□□ -0.28
SPG7-209ENST00000564047 RFWD3Q6PCD5 774 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 FBXO38Q6PIJ6 1188 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 RNF135Q8IUD6 432 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 PLD5Q8N7P1 536 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 TTC13Q8NBP0 860 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 LRRN4CLQ8ND94 238 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 TTC16Q8NEE8 873 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 BPIFB1Q8TDL5 484 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 IGSF8Q969P0 613 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 RSPRY1Q96DX4 576 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 PRICKLE1Q96MT3 831 aaPredicted RBP13.29□□□□□ -0.28
SPG7-209ENST00000564047 IRF2BPLQ9H1B7 796 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 ZFP14Q9HCL3 533 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 SMARCAL1Q9NZC9 954 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 OGFRQ9NZT2 677 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 EPS15L1Q9UBC2 864 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.29□□□□□ -0.286e-6■■□□□ 13.3
SPG7-209ENST00000564047 V9GYY5 206 aaPredicted RBP13.29□□□□□ -0.28
SPG7-209ENST00000564047 FAM186AA6NE01 2351 aa13.29□□□□□ -0.28
SPG7-209ENST00000564047 TCRBV7S2A1N4TA0A589 114 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 HEPACAM2A8MVW5 462 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 APOC4-APOC2K7ER74 178 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 KRIT1O00522 736 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 SCAMP3O14828 347 aaKnown RBP13.28□□□□□ -0.28
SPG7-209ENST00000564047 ATP8B1O43520 1251 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 APOC2P02655 101 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 DYNLT1P63172 113 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 SIX1Q15475 284 aaPredicted RBP13.28□□□□□ -0.28
SPG7-209ENST00000564047 GLIPR1L2Q4G1C9 344 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 MPPE1Q53F39 396 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 MPP7Q5T2T1 576 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 TMCO3Q6UWJ1 677 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 CHST9Q7L1S5 443 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 NLRP14Q86W24 1093 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 ZDHHC14Q8IZN3 488 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 LZTR1Q8N653 840 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 RTL3Q8N8U3 475 aaKnown RBP13.28□□□□□ -0.28
SPG7-209ENST00000564047 TDRD5Q8NAT2 981 aaKnown RBP13.28□□□□□ -0.28
SPG7-209ENST00000564047 HJURPQ8NCD3 748 aaPredicted RBP13.28□□□□□ -0.28
SPG7-209ENST00000564047 ELSPBP1Q96BH3 223 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 MYEOVQ96EZ4 313 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 LRRC3BQ96PB8 259 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 FRMD8P1Q9BZ68 369 aaPredicted RBP13.28□□□□□ -0.28
SPG7-209ENST00000564047 HOMER3Q9NSC5 361 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 TMEM248Q9NWD8 314 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 MPP6Q9NZW5 540 aa13.28□□□□□ -0.28
SPG7-209ENST00000564047 KMT2EQ8IZD2 1858 aa13.27□□□□□ -0.28
SPG7-209ENST00000564047 GOLGA6L10A0A0M3HER8 536 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 TYW5A2RUC4 315 aaKnown RBP13.27□□□□□ -0.29
SPG7-209ENST00000564047 TMEM221A6NGB7 291 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 CCDC188H7C350 402 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 M0R296 226 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 TSPAN3O60637 253 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 CLDN11O75508 207 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 TUBBP07437 444 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 SERPINB6P35237 376 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 NR2C2P49116 596 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 MAPKAPK2P49137 400 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 IRAK1P51617 712 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 CDH4P55283 916 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 TCF15Q12870 199 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 CCNG2Q16589 344 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 ALFQ53S48 1182 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 TANGO2Q6ICL3 276 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 MTSS1LQ765P7 747 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 BZW1Q7L1Q6 419 aaKnown RBP13.27□□□□□ -0.29
SPG7-209ENST00000564047 ADAT2Q7Z6V5 191 aaKnown RBP13.27□□□□□ -0.29
SPG7-209ENST00000564047 PRELID2Q8N945 189 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 SPATA4Q8NEY3 305 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 P3H4Q92791 437 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 TMA16Q96EY4 203 aaKnown RBP13.27□□□□□ -0.29
SPG7-209ENST00000564047 RPGRIP1Q96KN7 1286 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 AP1M1Q9BXS5 423 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 ETNK2Q9NVF9 386 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 THG1LQ9NWX6 298 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms