RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 UBE2Q2Q8WVN8 375 aa27.79■■■□□ 2.04
SH3GL3-205ENST00000563901 ATXN2LQ8WWM7 1075 aaKnown RBP27.79■■■□□ 2.04
SH3GL3-205ENST00000563901 PRKAG3Q9UGI9 489 aa27.79■■■□□ 2.04
SH3GL3-205ENST00000563901 DCLK1O15075 740 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 PENKP01210 267 aaPredicted RBP27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 CYBBP04839 570 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 ADH5P11766 374 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 RUNX3Q13761 415 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 GAB4Q2WGN9 574 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 SEL1L2Q5TEA6 688 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 CCDC33Q8N5R6 958 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 NPWQ8N729 165 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 OR52K2Q8NGK3 314 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 NYNRINQ9P2P1 1898 aaKnown RBP27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 RHOQP17081 205 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 COPS2P61201 443 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 PPP2R5EQ16537 467 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 NCBP2-AS2Q69YL0 99 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 ADAT2Q7Z6V5 191 aaKnown RBP27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 C12orf40Q86WS4 652 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 TP53INP2Q8IXH6 220 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 RTL3Q8N8U3 475 aaKnown RBP27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 CATSPERBQ9H7T0 1116 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 MARK1Q9P0L2 795 aa27.78■■■□□ 2.04
SH3GL3-205ENST00000563901 A0A1B0GVM2 712 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 TYW5A2RUC4 315 aaKnown RBP27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 TCAF2A6NFQ2 919 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 FGF10O15520 208 aaPredicted RBP27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 CST8O60676 142 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 LUC7L3O95232 432 aaKnown RBP27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 MAP3K6O95382 1288 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 ADH1CP00326 375 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 HTR7P34969 479 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 SOX9P48436 509 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 ZNF135P52742 658 aaPredicted RBP27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 CDH4P55283 916 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 FSCBQ5H9T9 825 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 NAIF1Q69YI7 327 aaPredicted RBP27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 NPNTQ6UXI9 565 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 VSIG1Q86XK7 387 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 NXPE3Q969Y0 559 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 CAPZA3Q96KX2 299 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 MAK16Q9BXY0 300 aaKnown RBP27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 TMEM248Q9NWD8 314 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 SAE1Q9UBE0 346 aaPredicted RBP27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 SAR1BQ9Y6B6 198 aa27.77■■■□□ 2.04
SH3GL3-205ENST00000563901 ZNF487B1APH4 448 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 KIF2AO00139 706 aaPredicted RBP27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 TRIM24O15164 1050 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 PTPN7P35236 360 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 TTC39BQ5VTQ0 682 aaPredicted RBP27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 CPA6Q8N4T0 437 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 PLD5Q8N7P1 536 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 HAUS1Q96CS2 278 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 CHFRQ96EP1 664 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 CELF6Q96J87 481 aaKnown RBP27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 PBKQ96KB5 322 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 KLC2Q9H0B6 622 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 CHD5Q8TDI0 1954 aa27.76■■■□□ 2.03
SH3GL3-205ENST00000563901 MFSD11O43934 449 aa27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 OR1E1P30953 314 aa27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 IER5LQ5T953 404 aa27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 SLC9A4Q6AI14 798 aa27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 ASTLQ6HA08 431 aaPredicted RBP27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 CXorf57Q6NSI4 855 aaKnown RBP27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 C1orf228Q6PIY5 440 aa27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 TMCO3Q6UWJ1 677 aa27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 CHST9Q7L1S5 443 aa27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 MFN1Q8IWA4 741 aa27.75■■■□□ 2.03
SH3GL3-205ENST00000563901 C19orf67A6NJJ6 358 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 H0Y626 953 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 APOL1O14791 398 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 HOXC11O43248 304 aaPredicted RBP27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 CLDN11O75508 207 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 TCP1P17987 556 aaKnown RBP27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 GBE1Q04446 702 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 GAD2Q05329 585 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 TDGQ13569 410 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 RNF43Q68DV7 783 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 SLC13A5Q86YT5 568 aaPredicted RBP27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 FAM118BQ9BPY3 351 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 NOL6Q9H6R4 1146 aaKnown RBP27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 SHROOM3Q8TF72 1996 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 WASH4PA8MWX3 477 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 FGGP02679 453 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 PECAM1P16284 738 aaPredicted RBP27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 GJA4P35212 333 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 CETN2P41208 172 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 SLC6A11P48066 632 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 ZNF177Q13360 481 aaPredicted RBP27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 CDH18Q13634 790 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 ITPRIPL2Q3MIP1 535 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 MPP7Q5T2T1 576 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 LRRN4Q8WUT4 740 aa27.74■■■□□ 2.03
SH3GL3-205ENST00000563901 PRLRP16471 622 aa27.73■■■□□ 2.03
SH3GL3-205ENST00000563901 MESP2Q0VG99 397 aa27.73■■■□□ 2.03
SH3GL3-205ENST00000563901 SLC10A2Q12908 348 aaPredicted RBP27.73■■■□□ 2.03
SH3GL3-205ENST00000563901 KLF1Q13351 362 aaPredicted RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms