RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FBXO25Q8TCJ0 367 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 HTR3CQ8WXA8 447 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 IGSF8Q969P0 613 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 AZIN2Q96A70 460 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 LRRC45Q96CN5 670 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 TCEAL4Q96EI5 215 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 FMO2Q99518 471 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 DONSONQ9NYP3 566 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 AGO1Q9UL18 857 aaKnown RBP22.56■■□□□ 1.2
LINC01960-201ENST00000563759 ITIH2P19823 946 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 IVDP26440 423 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 SLC6A4P31645 630 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 IRAK1P51617 712 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 SLC7A9P82251 487 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 GALNT2Q10471 571 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 PRKD1Q15139 912 aaPredicted RBP22.56■■□□□ 1.2
LINC01960-201ENST00000563759 CHRDL2Q6WN34 429 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 GRASPQ7Z6J2 395 aaPredicted RBP22.56■■□□□ 1.2
LINC01960-201ENST00000563759 RTP4Q96DX8 246 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 CDCA3Q99618 268 aaPredicted RBP22.56■■□□□ 1.2
LINC01960-201ENST00000563759 FAM129AQ9BZQ8 928 aa22.56■■□□□ 1.2
LINC01960-201ENST00000563759 NUP210Q8TEM1 1887 aaPredicted RBP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 CHD5Q8TDI0 1954 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 WASH4PA8MWX3 477 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 DFFAO00273 331 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 POU2F2P09086 479 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 VAV1P15498 845 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 DDX6P26196 483 aaKnown RBP eCLIP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 RPL22P35268 128 aaKnown RBP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 AVPR1AP37288 418 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 GARSP41250 739 aaKnown RBP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 TEAD2Q15562 447 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 SLC5A9Q2M3M2 681 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 ALFQ53S48 1182 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 RABGAP1LQ5R372 815 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 ZDHHC24Q6UX98 284 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 NLRP14Q86W24 1093 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 CIR1Q86X95 450 aaPredicted RBP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 SMG7Q92540 1137 aaKnown RBP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 ART4Q93070 314 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 WBP2Q969T9 261 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 ZNF707Q96C28 371 aaPredicted RBP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 HDAC11Q96DB2 347 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 DDX50Q9BQ39 737 aaKnown RBP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 BRD8Q9H0E9 1235 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 ZDHHC18Q9NUE0 388 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 NDFIP2Q9NV92 336 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 TMEM248Q9NWD8 314 aa22.55■■□□□ 1.2
LINC01960-201ENST00000563759 MTRF1LQ9UGC7 380 aaKnown RBP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 LSM7Q9UK45 103 aaKnown RBP22.55■■□□□ 1.2
LINC01960-201ENST00000563759 ZNF189O75820 626 aaPredicted RBP22.54■■□□□ 1.2
LINC01960-201ENST00000563759 CNTN5O94779 1100 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 STK10O94804 968 aaKnown RBP22.54■■□□□ 1.2
LINC01960-201ENST00000563759 FAM153BP0C7A2 387 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 ITGA8P53708 1063 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 NTHL1P78549 312 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 FAM153CQ494X1 144 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 ADGRF1Q5T601 910 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 TAB3Q8N5C8 712 aaPredicted RBP22.54■■□□□ 1.2
LINC01960-201ENST00000563759 ATPAF2Q8N5M1 289 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 SLC46A2Q9BY10 475 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 KLC2Q9H0B6 622 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 SFXN1Q9H9B4 322 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 SEPT10Q9P0V9 454 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 FAM153AQ9UHL3 310 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 ANAPC5Q9UJX4 755 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 SH3BP1Q9Y3L3 701 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 DRGXA6NNA5 263 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 DNALI1O14645 258 aaPredicted RBP22.54■■□□□ 1.2
LINC01960-201ENST00000563759 SCAMP3O14828 347 aaKnown RBP22.54■■□□□ 1.2
LINC01960-201ENST00000563759 LATS1O95835 1130 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 ZXDBP98169 803 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 PPIDQ08752 370 aaKnown RBP22.54■■□□□ 1.2
LINC01960-201ENST00000563759 ADAMTS19Q8TE59 1207 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 P2RY11Q96G91 374 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 IGFLR1Q9H665 355 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 PAK5Q9P286 719 aa22.54■■□□□ 1.2
LINC01960-201ENST00000563759 NDC80O14777 642 aa22.53■■□□□ 1.2
LINC01960-201ENST00000563759 CAV1Q03135 178 aa22.53■■□□□ 1.2
LINC01960-201ENST00000563759 TMC5Q6UXY8 1006 aa22.53■■□□□ 1.2
LINC01960-201ENST00000563759 ARHGAP12Q8IWW6 846 aa22.53■■□□□ 1.2
LINC01960-201ENST00000563759 C12orf76Q8N812 135 aaPredicted RBP22.53■■□□□ 1.2
LINC01960-201ENST00000563759 CAVIN3Q969G5 261 aa22.53■■□□□ 1.2
LINC01960-201ENST00000563759 MYEOVQ96EZ4 313 aa22.53■■□□□ 1.2
LINC01960-201ENST00000563759 TASP1Q9H6P5 420 aa22.53■■□□□ 1.2
LINC01960-201ENST00000563759 CFAP97Q9P2B7 532 aa22.53■■□□□ 1.2
LINC01960-201ENST00000563759 TPX2Q9ULW0 747 aaKnown RBP22.53■■□□□ 1.2
LINC01960-201ENST00000563759 RNF103O00237 685 aa22.52■■□□□ 1.2
LINC01960-201ENST00000563759 ZNF197O14709 1029 aa22.52■■□□□ 1.2
LINC01960-201ENST00000563759 BASP1P80723 227 aaKnown RBP22.52■■□□□ 1.2
LINC01960-201ENST00000563759 CFAP52Q8N1V2 620 aa22.52■■□□□ 1.2
LINC01960-201ENST00000563759 VN1R2Q8NFZ6 395 aa22.52■■□□□ 1.2
LINC01960-201ENST00000563759 CCDC110Q8TBZ0 833 aa22.52■■□□□ 1.2
LINC01960-201ENST00000563759 DEPDC1BQ8WUY9 529 aa22.52■■□□□ 1.2
LINC01960-201ENST00000563759 PRICKLE1Q96MT3 831 aaPredicted RBP22.52■■□□□ 1.2
LINC01960-201ENST00000563759 SMG9Q9H0W8 520 aaKnown RBP22.52■■□□□ 1.2
LINC01960-201ENST00000563759 DZANK1Q9NVP4 752 aa22.52■■□□□ 1.2
LINC01960-201ENST00000563759 ZFP37Q9Y6Q3 630 aaPredicted RBP22.52■■□□□ 1.2
LINC01960-201ENST00000563759 TRDMT1O14717 391 aaKnown RBP22.51■■□□□ 1.19
LINC01960-201ENST00000563759 MOSPD3O75425 235 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms