RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TMPRSS3P57727 454 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 RPS24P62847 133 aaKnown RBP10.76□□□□□ -0.69
SF3B3-204ENST00000563739 MPP7Q5T2T1 576 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 STK40Q8N2I9 435 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 EXD3Q8N9H8 876 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 TMA16Q96EY4 203 aaKnown RBP10.76□□□□□ -0.69
SF3B3-204ENST00000563739 SERAC1Q96JX3 654 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 FCRL2Q96LA5 508 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-204ENST00000563739 ZNF578Q96N58 590 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-204ENST00000563739 ZSWIM1Q9BR11 485 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 CYTH4Q9UIA0 394 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 XPO7Q9UIA9 1087 aaKnown RBP10.76□□□□□ -0.69
SF3B3-204ENST00000563739 SARDHQ9UL12 918 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 STRIP2Q9ULQ0 834 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 SCML1Q9UN30 329 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 ERVW-1Q9UQF0 538 aa10.76□□□□□ -0.69
SF3B3-204ENST00000563739 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-204ENST00000563739 AHCTF1Q8WYP5 2266 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 PVALEFA0A1B0GWK0 134 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 IKBKBO14920 756 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 EFSO43281 561 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 OPA1O60313 960 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 RTN2O75298 545 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 FYNP06241 537 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 MZF1P28698 734 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-204ENST00000563739 NUMBP49757 651 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 PDX1P52945 283 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 DAOAP59103 153 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 TAS2R38P59533 333 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 GABREP78334 506 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 ARID5AQ03989 594 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 ADIGQ0VDE8 80 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 TAF1BQ53T94 588 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-204ENST00000563739 PITRM1Q5JRX3 1037 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 AGBL4Q5VU57 503 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 BSPRYQ5W0U4 402 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 RSRC2Q7L4I2 434 aaKnown RBP10.75□□□□□ -0.69
SF3B3-204ENST00000563739 APCDD1Q8J025 514 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 MFSD2AQ8NA29 543 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 ANKRD52Q8NB46 1076 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 KDM1BQ8NB78 822 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 TMEM145Q8NBT3 493 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 OR4C6Q8NH72 309 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 FIBINQ8TAL6 211 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 CLEC4CQ8WTT0 213 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 FRS2Q8WU20 508 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 VCPIP1Q96JH7 1222 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 NUCKS1Q9H1E3 243 aaKnown RBP10.75□□□□□ -0.69
SF3B3-204ENST00000563739 CISHQ9NSE2 258 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 SUN2Q9UH99 717 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 PLA2G4CQ9UP65 541 aa10.75□□□□□ -0.69
SF3B3-204ENST00000563739 UTP20O75691 2785 aaKnown RBP10.75□□□□□ -0.69
SF3B3-204ENST00000563739 SPTAN1Q13813 2472 aaKnown RBP10.75□□□□□ -0.69
SF3B3-204ENST00000563739 LRRC72A6NJI9 287 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 K7ENP7 123 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 TERTO14746 1132 aaKnown RBP10.74□□□□□ -0.69
SF3B3-204ENST00000563739 XPO1O14980 1071 aaKnown RBP10.74□□□□□ -0.69
SF3B3-204ENST00000563739 SPTLC2O15270 562 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 PLRG1O43660 514 aaKnown RBP10.74□□□□□ -0.69
SF3B3-204ENST00000563739 ACTN4O43707 911 aaKnown RBP10.74□□□□□ -0.69
SF3B3-204ENST00000563739 PPP6R2O75170 966 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 GOT1P17174 413 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 POLR2EP19388 210 aaKnown RBP10.74□□□□□ -0.69
SF3B3-204ENST00000563739 DGKAP23743 735 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 ARRB1P49407 418 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-204ENST00000563739 ZNF211Q13398 564 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-204ENST00000563739 E2F5Q15329 346 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 GOLGA7BQ2TAP0 167 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 LINC00303Q3SY05 128 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 INO80CQ6PI98 192 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-204ENST00000563739 IGF2-ASQ6U949 168 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 SLC22A18ASQ8N1D0 253 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 SCML4Q8N228 414 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 ARHGAP18Q8N392 663 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 EEF2KMTQ96G04 330 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 MED8Q96G25 268 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 NOX5Q96PH1 765 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 TRIM4Q9C037 500 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 GPR27Q9NS67 375 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 TJP2Q9UDY2 1190 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 TSPAN16Q9UKR8 245 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 TRAF3IP3Q9Y228 551 aa10.74□□□□□ -0.69
SF3B3-204ENST00000563739 USP9YO00507 2555 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 CDRT15L2A8MXV6 281 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 PDXKO00764 312 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 POLR2DO15514 142 aaKnown RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 SLC28A2O43868 658 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 ACSL4O60488 711 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 CSO75390 466 aaKnown RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 CLSTN1O94985 981 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 ATP5BP06576 529 aaKnown RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 SLFN14P0C7P3 912 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 CKMT1AP12532 417 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 MAT2AP31153 395 aaKnown RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 AFMP43652 599 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 LSSP48449 732 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 HARS2P49590 506 aaKnown RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 VAMP7P51809 220 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 ZNF445P59923 1031 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms