RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 CARNMT1Q8N4J0 409 aa15.27■□□□□ 0.04
RPUSD1-204ENST00000563560 C3orf20Q8ND61 904 aa15.27■□□□□ 0.04
RPUSD1-204ENST00000563560 PCMTD1Q96MG8 357 aaPredicted RBP15.27■□□□□ 0.04
RPUSD1-204ENST00000563560 EDEM3Q9BZQ6 932 aa15.27■□□□□ 0.04
RPUSD1-204ENST00000563560 SMOC1Q9H4F8 434 aa15.27■□□□□ 0.04
RPUSD1-204ENST00000563560 PRSS16Q9NQE7 514 aa15.27■□□□□ 0.04
RPUSD1-204ENST00000563560 ITM2CQ9NQX7 267 aa15.27■□□□□ 0.04
RPUSD1-204ENST00000563560 COX16Q9P0S2 106 aa15.27■□□□□ 0.04
RPUSD1-204ENST00000563560 VANGL2Q9ULK5 521 aa15.27■□□□□ 0.04
RPUSD1-204ENST00000563560 TP53BP1Q12888 1972 aaPredicted RBP15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 RHOBTB1O94844 696 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 CAVIN2O95810 425 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 MPLP40238 635 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 PTGER3P43115 390 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 HDAC4P56524 1084 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 DEUP1Q05D60 604 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 CCDC6Q16204 474 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 C15orf59Q2T9L4 293 aaPredicted RBP15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 WDR59Q6PJI9 974 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 SERPINA13PQ6UXR4 307 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 PHLDB2Q86SQ0 1253 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 MCOLN2Q8IZK6 566 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 ZNF366Q8N895 744 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 MSANTD4Q8NCY6 345 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 RXFP2Q8WXD0 754 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 HINFPQ9BQA5 517 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 MAGEB5Q9BZ81 275 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 MTG2Q9H4K7 406 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 WDCPQ9H6R7 721 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 TMEM74BQ9NUR3 256 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 TMEM51Q9NW97 253 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 ADAM22Q9P0K1 906 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 KIAA1522Q9P206 1035 aaPredicted RBP15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 BCCIPQ9P287 314 aaKnown RBP eCLIP15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 ERVW-1Q9UQF0 538 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 SPEGQ15772 3267 aa15.26■□□□□ 0.03
RPUSD1-204ENST00000563560 A0A1W2PQJ5 194 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 SIGLEC16A6NMB1 481 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 DDX3XO00571 662 aaKnown RBP eCLIP15.25■□□□□ 0.033e-6■■■■□ 26.6
RPUSD1-204ENST00000563560 TM4SF5O14894 197 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 GDF9O60383 454 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 ASLP04424 464 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 EPHX1P07099 455 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 POLR2EP19388 210 aaKnown RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 RDXP35241 583 aaKnown RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 NSFP46459 744 aaKnown RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 OGDHQ02218 1023 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 NRG1Q02297 640 aaPredicted RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 SLC12A1Q13621 1099 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 CDH18Q13634 790 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 SF3A2Q15428 464 aaKnown RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 ELF2Q15723 593 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 SKOR2Q2VWA4 1001 aaPredicted RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 ACAD10Q6JQN1 1059 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 STRADAQ7RTN6 431 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 TMPRSS6Q8IU80 811 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 OR2T3Q8NH03 318 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 FRS2Q8WU20 508 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 ZNF419Q96HQ0 510 aaPredicted RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 RPRD1AQ96P16 312 aaPredicted RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 HAPLN3Q96S86 360 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 PSMB7Q99436 277 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 FEM1AQ9BSK4 669 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 HAUS4Q9H6D7 363 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 PRDM16Q9HAZ2 1276 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 WSB2Q9NYS7 404 aaPredicted RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 SLC12A6Q9UHW9 1150 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 SLCO3A1Q9UIG8 710 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 CNOT1A5YKK6 2376 aaKnown RBP15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 PLXNA2O75051 1894 aa15.25■□□□□ 0.03
RPUSD1-204ENST00000563560 ASCC3Q8N3C0 2202 aaKnown RBP15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 SPTBN2O15020 2390 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 ZNF217O75362 1048 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 CLDN11O75508 207 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 CALB1P05937 261 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 ATP5BP06576 529 aaKnown RBP15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 SRPRAP08240 638 aaKnown RBP15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 PDGFRAP16234 1089 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 TPMTP51580 245 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 CDH4P55283 916 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 RPS14P62263 151 aaKnown RBP15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 RPL7AP62424 266 aaKnown RBP15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 LMNB2Q03252 620 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 STARD3Q14849 445 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 E2F5Q15329 346 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 HNRNPA1L2Q32P51 320 aaKnown RBP15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 FILIP1LQ4L180 1135 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 RABGAP1LQ5R372 815 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 C9orf64Q5T6V5 341 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 TCEAL6Q6IPX3 200 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 FAM131BQ86XD5 332 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 DNAAF5Q86Y56 855 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 TMEFF1Q8IYR6 380 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 TCEAL3Q969E4 200 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 RNF34Q969K3 372 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 RSPH9Q9H1X1 276 aaPredicted RBP15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 VPS45Q9NRW7 570 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 PILRBQ9UKJ0 227 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms