RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PMPCAQ10713 525 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 GALNT3Q14435 633 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 ARL13AQ5H913 290 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 WASHC2DQ5SRD0 308 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 C10orf76Q5T2E6 689 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 RINT1Q6NUQ1 792 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 PARM1Q6UWI2 310 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 TRILQ7L0X0 811 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 KDELC2Q7Z4H8 507 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 C11orf96Q7Z7L8 435 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 C7orf57Q8NEG2 295 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 NEUROG1Q92886 237 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 ZNF419Q96HQ0 510 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 URB1-AS1Q96HZ7 61 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 CCDC138Q96M89 665 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 NTPCRQ9BSD7 190 aaKnown RBP3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 MECRQ9BV79 373 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 ISCUQ9H1K1 167 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 MAGEH1Q9H213 219 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 CCDC134Q9H6E4 229 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D14Q9P2M4 693 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 PHTF1Q9UMS5 762 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 TNFSF13BQ9Y275 285 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 ZBTB1Q9Y2K1 713 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 CKAP5Q14008 2032 aa3.71□□□□□ -1.82
HMGB1P33-201ENST00000563485 PRSS44E7EML9 344 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 NBPF7P0C2Y1 421 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 TGFB3P10600 412 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 ABCB4P21439 1286 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 MLH1P40692 756 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 AK2P54819 239 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 ASIC2Q16515 512 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 Q5PR19 223 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 ZNF324BQ6AW86 544 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 IL31Q6EBC2 164 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 TMEM88Q6PEY1 159 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 DLK2Q6UY11 383 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 C18orf65Q6ZTR6 163 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 IQCF1Q8N6M8 205 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 CLEC4CQ8WTT0 213 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 WDR60Q8WVS4 1066 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 MUL1Q969V5 352 aa3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 PRPF18Q99633 342 aaKnown RBP3.7□□□□□ -1.82
HMGB1P33-201ENST00000563485 CYP3A7-CYP3A51PA0A087WV96 503 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 AQP12BA6NM10 295 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 KCNJ18B7U540 433 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 MCIDASD6RGH6 385 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 DNPH1O43598 174 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 ASNA1O43681 348 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 KLKB1P03952 638 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 CYP3A4P08684 503 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 CYP3A7P24462 503 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 NEK3P51956 506 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 RNASELQ05823 741 aaKnown RBP3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 HLTFQ14527 1009 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 SLC4A8Q2Y0W8 1093 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 ALG10Q5BKT4 473 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 ALG10BQ5I7T1 473 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 Q6ZTK2 550 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 SPATA2LQ8IUW3 424 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 DCP1BQ8IZD4 617 aaKnown RBP3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 MED30Q96HR3 178 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 MEIS3Q99687 375 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 SORBS1Q9BX66 1292 aaKnown RBP3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 PLAC1Q9HBJ0 212 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 ZNF304Q9HCX3 659 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 KRCC1Q9NPI7 259 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 SELENONQ9NZV5 590 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 MYO6Q9UM54 1294 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 NFU1Q9UMS0 254 aa3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 COPG1Q9Y678 874 aaKnown RBP3.69□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3DA0A087WVF3 549 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3IA0A087WXS9 549 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3EA0A087X179 549 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3KA0A087X1G2 549 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3BA6NDS4 549 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3FA6NER0 549 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 GAGE12JA6NER3 117 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 SLC38A8A6NNN8 435 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 BECN2A8MW95 431 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3LB9A6J9 549 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 ACAA1P09110 424 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3HP0C7X1 549 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 CPA1P15085 419 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 RFX5P48382 616 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 ADPRHP54922 357 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 POLE2P56282 527 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 RBM6P78332 1123 aaKnown RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 LTBQ06643 244 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 SF3A3Q12874 501 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TRAF1Q13077 416 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 BTBD16Q32M84 506 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 INO80DQ53TQ3 878 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3GQ6DHY5 549 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3CQ6IPX1 549 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 ERAP2Q6P179 960 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 PDXDC1Q6P996 788 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms