RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 GCNT1Q02742 428 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 CAMK2BQ13554 666 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 KCNJ12Q14500 433 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 COL28A1Q2UY09 1125 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 APCDD1Q8J025 514 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 KDM1BQ8NB78 822 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 FAM149B1Q96BN6 582 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 TIGD1Q96MW7 591 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 DDX50Q9BQ39 737 aaKnown RBP17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 SCML1Q9UN30 329 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 CNTN6Q9UQ52 1028 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 ITIH6Q6UXX5 1313 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 A0A1B0GTQ1 180 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 NUMBP49757 651 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 STIM1Q13586 685 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 CDH18Q13634 790 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 SHBQ15464 509 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 ZC3H12AQ5D1E8 599 aaKnown RBP17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 RAP1GAP2Q684P5 730 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 KLHL10Q6JEL2 608 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 ADAT2Q7Z6V5 191 aaKnown RBP17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 TRIM59Q8IWR1 403 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 LGI2Q8N0V4 545 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 AADATQ8N5Z0 425 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 PTPRN2Q92932 1015 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 RPL10LQ96L21 214 aaKnown RBP17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 SLC4A5Q9BY07 1137 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 GTPBP4Q9BZE4 634 aaKnown RBP17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 ACP6Q9NPH0 428 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 ST7Q9NRC1 585 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 ADAMTS1Q9UHI8 967 aa17.38■□□□□ 0.37
HDGFL3-203ENST00000563404 ACACAQ13085 2346 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 A0A1W2PR77 199 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 TARSL2A2RTX5 802 aaKnown RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 TYW5A2RUC4 315 aaKnown RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 GOLGA6L4A6NEF3 574 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 TRABD2BA6NFA1 517 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 RNASEH1O60930 286 aaKnown RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 RNASEH2AO75792 299 aaKnown RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 IGLV3-25P01717 112 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 SRPRAP08240 638 aaKnown RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 TACR2P21452 398 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 SLC8A1P32418 973 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 STK19P49842 368 aaPredicted RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 KCNH2Q12809 1159 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 EIF4EBP2Q13542 120 aaPredicted RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 SMAD1Q15797 465 aaKnown RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 CCDC157Q569K6 752 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 BEND5Q7L4P6 421 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 PDZD3Q86UT5 571 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 CIR1Q86X95 450 aaPredicted RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 GATAD2AQ86YP4 633 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 STK40Q8N2I9 435 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 OR2T34Q8NGX1 318 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 HNRNPLLQ8WVV9 542 aaKnown RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 NELFBQ8WX92 580 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 ACE2Q9BYF1 805 aaPredicted RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 INTS2Q9H0H0 1204 aaKnown RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 DKK4Q9UBT3 224 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 TJP2Q9UDY2 1190 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 IGSF10Q6WRI0 2623 aa17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 TP53BP1Q12888 1972 aaPredicted RBP17.37■□□□□ 0.37
HDGFL3-203ENST00000563404 FASNP49327 2511 aaKnown RBP17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 EDDM13A0A1B0GTR0 161 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 E5RJQ4 531 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 CBX4O00257 560 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 VAV1P15498 845 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 ACADSBP45954 432 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 PSMD8P48556 350 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 METAP1P53582 386 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 C21orf59P57076 290 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 ECT2LQ008S8 904 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 CYP4F3Q08477 520 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 CETN1Q12798 172 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 TAF5Q15542 800 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 DHRS13Q6UX07 377 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 CHSY1Q86X52 802 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 ELOA2Q8IYF1 753 aaPredicted RBP17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 GALNT15Q8N3T1 639 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 STK32AQ8WU08 396 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 ELF4Q99607 663 aaPredicted RBP17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 OMDQ99983 421 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 FZD4Q9ULV1 537 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 CTNND2Q9UQB3 1225 aa17.36■□□□□ 0.37
HDGFL3-203ENST00000563404 GOLGA4Q13439 2230 aaKnown RBP17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 LRRC72A6NJI9 287 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 SART1O43290 800 aaKnown RBP17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 DFNA5O60443 496 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 TRUB2O95900 331 aaKnown RBP17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 KRT5P13647 590 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 MZF1P28698 734 aaPredicted RBP17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 CCR5P51681 352 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 ADPRHP54922 357 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 CLDN6P56747 220 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 STX17P56962 302 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 PPP2CBP62714 309 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 PPP2CAP67775 309 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 MORC3Q14149 939 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 SOWAHCQ53LP3 525 aaPredicted RBP17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 FOXR2Q6PJQ5 311 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms