RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 NT5C1BQ96P26 610 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 MED15Q96RN5 788 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 LRRC4Q9HBW1 653 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 TMPRSS4Q9NRS4 437 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 THAP10Q9P2Z0 257 aaPredicted RBP10.53□□□□□ -0.72
SNX29-202ENST00000563308 HESX1Q9UBX0 185 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 SFMBT1Q9UHJ3 866 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 STOML2Q9UJZ1 356 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 STRIP2Q9ULQ0 834 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 CNTN6Q9UQ52 1028 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 CTNND2Q9UQB3 1225 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 CLCA2Q9UQC9 943 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 STON1Q9Y6Q2 735 aa10.53□□□□□ -0.72
SNX29-202ENST00000563308 CLEC18AA5D8T8 446 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 MSI1O43347 362 aaKnown RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 LDOC1O95751 146 aaPredicted RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 IGLV3-27P01718 113 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 FYNP06241 537 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 BRD2P25440 801 aaKnown RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 HOXD9P28356 352 aaPredicted RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 PPP1R2P41236 205 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 RPL34P49207 117 aaKnown RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 RGS7P49802 495 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 CCT8P50990 548 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 STX17P56962 302 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 GCNT1Q02742 428 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 NCAPHQ15003 741 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 FUT11Q495W5 492 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 MSANTD2Q6P1R3 559 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 CLEC18BQ6UXF7 455 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 RRAGAQ7L523 313 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 SRRM1Q8IYB3 904 aaKnown RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 SIX6OS1Q8N1H7 587 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 PPM1KQ8N3J5 372 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 CLEC18CQ8NCF0 446 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 CLEC4CQ8WTT0 213 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 SORCS1Q8WY21 1168 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 IPO9Q96P70 1041 aaKnown RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 MKRN2Q9H000 416 aaKnown RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 CNGB3Q9NQW8 809 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 OLA1Q9NTK5 396 aaKnown RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 ELOVL2Q9NXB9 296 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 HBS1LQ9Y450 684 aaKnown RBP10.52□□□□□ -0.73
SNX29-202ENST00000563308 PCDHB4Q9Y5E5 795 aa10.52□□□□□ -0.73
SNX29-202ENST00000563308 FBN3Q75N90 2809 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 PIK3R2O00459 728 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 LCP1P13796 627 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 SGSHP51688 502 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 ERVPABLB-1P60509 514 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 PAK1Q13153 545 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 TEAD4Q15561 434 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 SDE2Q6IQ49 451 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 ANKS1BQ7Z6G8 1248 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 KIAA0907Q7Z7F0 614 aaPredicted RBP10.51□□□□□ -0.73
SNX29-202ENST00000563308 METTL3Q86U44 580 aaKnown RBP10.51□□□□□ -0.73
SNX29-202ENST00000563308 ZC3H18Q86VM9 953 aaKnown RBP10.51□□□□□ -0.73
SNX29-202ENST00000563308 DDI1Q8WTU0 396 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 IRGQQ8WZA9 623 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.51□□□□□ -0.73
SNX29-202ENST00000563308 SRRTQ9BXP5 876 aaKnown RBP10.51□□□□□ -0.73
SNX29-202ENST00000563308 SLC2A11Q9BYW1 496 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 INTS2Q9H0H0 1204 aaKnown RBP10.51□□□□□ -0.73
SNX29-202ENST00000563308 THSD1Q9NS62 852 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 ABCC13Q9NSE7 274 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.51□□□□□ -0.73
SNX29-202ENST00000563308 NFE2L3Q9Y4A8 694 aa10.51□□□□□ -0.73
SNX29-202ENST00000563308 ICE1Q9Y2F5 2266 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 BICDL2A1A5D9 508 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 M0QYV0 167 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 NPC1O15118 1278 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 TSPAN3O60637 253 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 LATS1O95835 1130 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 LTFP02788 710 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 CYBBP04839 570 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 C7P10643 843 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 PRKCHP24723 683 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 HLA-FP30511 346 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 GPD2P43304 727 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 HARS2P49590 506 aaKnown RBP10.5□□□□□ -0.73
SNX29-202ENST00000563308 COPAP53621 1224 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 FOXK1P85037 733 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 ZNF234Q14588 700 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 STILQ15468 1287 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 MPPE1Q53F39 396 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 FAM133BQ5BKY9 247 aaKnown RBP10.5□□□□□ -0.73
SNX29-202ENST00000563308 ADGRF1Q5T601 910 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 DENND1BQ6P3S1 775 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 ADIPOR2Q86V24 386 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 IRF2BP1Q8IU81 584 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.5□□□□□ -0.73
SNX29-202ENST00000563308 WFDC5Q8TCV5 224 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 RNF139Q8WU17 664 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 MYEOVQ96EZ4 313 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 CNDP2Q96KP4 475 aaKnown RBP10.5□□□□□ -0.73
SNX29-202ENST00000563308 LMLNQ96KR4 655 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 HSFY1Q96LI6 401 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 SEMA3CQ99985 751 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 ACP6Q9NPH0 428 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 ITM2CQ9NQX7 267 aa10.5□□□□□ -0.73
SNX29-202ENST00000563308 USP36Q9P275 1121 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms