RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 MAPK7Q13164 816 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 ETFDHQ16134 617 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 PCID2Q5JVF3 399 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 FAM83BQ5T0W9 1011 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 SPICE1Q8N0Z3 855 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 RP9Q8TA86 221 aaKnown RBP5.22□□□□□ -1.57
SMG1-206ENST00000562668 CDK5RAP3Q96JB5 506 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 TCEANC2Q96MN5 208 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 MOGAT1Q96PD6 335 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 NEK1Q96PY6 1258 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 TM6SF1Q9BZW5 370 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 RPAP3Q9H6T3 665 aaPredicted RBP5.22□□□□□ -1.57
SMG1-206ENST00000562668 SH2D4AQ9H788 454 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 HOMER2Q9NSB8 354 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 FBXO28Q9NVF7 368 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 MORF4L1Q9UBU8 362 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 STX8Q9UNK0 236 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 SMCHD1A6NHR9 2005 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 CASP8AP2Q9UKL3 1982 aa5.22□□□□□ -1.57
SMG1-206ENST00000562668 TUBB4AP04350 444 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 NPSP0C0P6 89 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 RPS6KB1P23443 525 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 MCCP23508 829 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 AKAP5P24588 427 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 MCM5P33992 734 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 LIFRP42702 1097 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 KCNJ5P48544 419 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 TPTEP56180 551 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 ANAPC15P60006 121 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 ZNF543Q08ER8 600 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 COG2Q14746 738 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 BRDTQ58F21 947 aaPredicted RBP5.21□□□□□ -1.58
SMG1-206ENST00000562668 CEP78Q5JTW2 689 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 SLC18B1Q6NT16 456 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 NAPRTQ6XQN6 538 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 IQCA1Q86XH1 822 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 CELF5Q8N6W0 485 aaKnown RBP5.21□□□□□ -1.58
SMG1-206ENST00000562668 GLG1Q92896 1179 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 R3HDM4Q96D70 268 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 PARK7Q99497 189 aaKnown RBP5.21□□□□□ -1.58
SMG1-206ENST00000562668 MACROD1Q9BQ69 325 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 SH2D3AQ9BRG2 576 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 LRRC2Q9BYS8 371 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 ARHGAP39Q9C0H5 1083 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 ALDH8A1Q9H2A2 487 aaPredicted RBP5.21□□□□□ -1.58
SMG1-206ENST00000562668 SARS2Q9NP81 518 aaKnown RBP5.21□□□□□ -1.58
SMG1-206ENST00000562668 TMOD4Q9NZQ9 345 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 CPA4Q9UI42 421 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 MAD2L2Q9UI95 211 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 SHOC2Q9UQ13 582 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 STXBP5LQ9Y2K9 1186 aa5.21□□□□□ -1.58
SMG1-206ENST00000562668 RBBP6Q7Z6E9 1792 aaKnown RBP5.21□□□□□ -1.58
SMG1-206ENST00000562668 LRRC37A2A6NM11 1700 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 DOCK3Q8IZD9 2030 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 PRRT4C9JH25 899 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 VWA5AO00534 786 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 IFIT3O14879 490 aaKnown RBP5.2□□□□□ -1.58
SMG1-206ENST00000562668 ATP2A1O14983 1001 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 CYTH3O43739 400 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 TJP3O95049 919 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 GOLGA8HP0CJ92 632 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 ZKSCAN1P17029 563 aaPredicted RBP5.2□□□□□ -1.58
SMG1-206ENST00000562668 LBX1P52954 281 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 TRDNQ13061 729 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 GTF2H3Q13889 308 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 E2F2Q14209 437 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 KRT32Q14532 448 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 GRM4Q14833 912 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 WTAPQ15007 396 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 FAM110CQ1W6H9 321 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 KHDC1LQ5JSQ8 128 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 SLC9A4Q6AI14 798 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 TRIM72Q6ZMU5 477 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 RUFY3Q7L099 469 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 BHLHA9Q7RTU4 235 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 CYP2W1Q8TAV3 490 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 DENND1AQ8TEH3 1009 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 USP6NLQ92738 828 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 JAKMIP1Q96N16 626 aaKnown RBP5.2□□□□□ -1.58
SMG1-206ENST00000562668 FCRL4Q96PJ5 515 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 MAP3K14Q99558 947 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 SLF1Q9BQI6 1058 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 QTRT1Q9BXR0 403 aaKnown RBP5.2□□□□□ -1.58
SMG1-206ENST00000562668 PORCNQ9H237 461 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 BHMT2Q9H2M3 363 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 RANBP17Q9H2T7 1088 aaKnown RBP5.2□□□□□ -1.58
SMG1-206ENST00000562668 CPVLQ9H3G5 476 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 SLC38A10Q9HBR0 1119 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 TCF7L1Q9HCS4 588 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 FEM1BQ9UK73 627 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 NDRG4Q9ULP0 352 aaKnown RBP5.2□□□□□ -1.58
SMG1-206ENST00000562668 PCDHA6Q9UN73 950 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 TBC1D30Q9Y2I9 924 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 ZNFX1Q9P2E3 1918 aaKnown RBP5.2□□□□□ -1.58
SMG1-206ENST00000562668 PLXNA1Q9UIW2 1896 aa5.2□□□□□ -1.58
SMG1-206ENST00000562668 MYH6P13533 1939 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 A1L4Q6 167 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 TMEM232C9JQI7 657 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 ADAMTS3O15072 1205 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms