RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 GANCQ8TET4 914 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 STK32AQ8WU08 396 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CDC6Q99741 560 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 EBF2Q9HAK2 575 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 NCKAP1Q9Y2A7 1128 aa17.28■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ANKRD11Q6UB99 2663 aaPredicted RBP17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ITIH6Q6UXX5 1313 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 A0A1W2PPC4 97 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 GOLGA8CPA6NN73 597 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CAPN9O14815 690 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 PCDHGA12O60330 932 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SRPRAP08240 638 aaKnown RBP17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ACADSBP45954 432 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 CCT8P50990 548 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ECT2LQ008S8 904 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 IL9RQ01113 521 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 EIF4EBP2Q13542 120 aaPredicted RBP17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SUZ12Q15022 739 aaKnown RBP17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MEA1Q16626 185 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ZC3H12AQ5D1E8 599 aaKnown RBP17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 NCEH1Q6PIU2 408 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TMPRSS7Q7RTY8 843 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TMEM110Q86TL2 294 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 MDM1Q8TC05 714 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 ZNF606Q8WXB4 792 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SLC6A18Q96N87 628 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 NEUROG2Q9H2A3 272 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 POPDC2Q9HBU9 364 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 UBE2TQ9NPD8 197 aaPredicted RBP17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TJP2Q9UDY2 1190 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 SLCO3A1Q9UIG8 710 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 GPSM3Q9Y4H4 160 aa17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.36
VPS9D1-AS1-201ENST00000562298 TARSL2A2RTX5 802 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 RNASEH1O60930 286 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 RNASEH2AO75792 299 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 GNA14O95837 355 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 TRUB2O95900 331 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 APOEP02649 317 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 TACR2P21452 398 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 GRK6P43250 576 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 NUMBP49757 651 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 YWHAZP63104 245 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 RACK1P63244 317 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 PAK1Q13153 545 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 KCNJ12Q14500 433 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 TAF5Q15542 800 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 ADAT2Q7Z6V5 191 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 CHSY1Q86X52 802 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 MARCH9Q86YJ5 346 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 CCDC117Q8IWD4 279 aaPredicted RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 AADATQ8N5Z0 425 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 BTN2A3PQ96KV6 586 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 RPL10LQ96L21 214 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 FAM129BQ96TA1 746 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 PRMT1Q99873 361 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 TRIM62Q9BVG3 475 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 SRRTQ9BXP5 876 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 CCDC86Q9H6F5 360 aaKnown RBP17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 ADAMTS1Q9UHI8 967 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 FZD4Q9ULV1 537 aa17.26■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 EDDM13A0A1B0GTR0 161 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 VILLO15195 856 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 MED7O43513 233 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 TNFSF14O43557 240 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 MOCS3O95396 460 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 WNT1P04628 370 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 GNA15P30679 374 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 SLC8A1P32418 973 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 PSMD8P48556 350 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 STK19P49842 368 aaPredicted RBP17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 PDCLQ13371 301 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 GJB7Q6PEY0 223 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 CIR1Q86X95 450 aaPredicted RBP17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 STK40Q8N2I9 435 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 OR2T34Q8NGX1 318 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 PTPRN2Q92932 1015 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 ACE2Q9BYF1 805 aaPredicted RBP17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 CEP83Q9Y592 693 aa17.25■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 SMG1Q96Q15 3661 aaKnown RBP17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 ADAMTS20P59510 1910 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 A0A1B0GTQ1 180 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 BECN2A8MW95 431 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 KCNU1A8MYU2 1149 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 WNT9AO14904 365 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 THAP12O43422 761 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 GADD45BO75293 160 aaPredicted RBP17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 VAV1P15498 845 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 ADPRHP54922 357 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 C21orf59P57076 290 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 APBA1Q02410 837 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 PRAMEF14Q5SWL7 426 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 TRIM65Q6PJ69 517 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 CCAR2Q8N163 923 aaKnown RBP17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 WDTC1Q8N5D0 677 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 MED15Q96RN5 788 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 OMDQ99983 421 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 THAP9Q9H5L6 903 aa17.24■□□□□ 0.35
VPS9D1-AS1-201ENST00000562298 LRRC72A6NJI9 287 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms