RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TEKT4Q8WW24 435 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 BHMTQ93088 406 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 GABRG3Q99928 467 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 USP18Q9UMW8 372 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 PCDHA13Q9Y5I0 950 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 SNX10Q9Y5X0 201 aa13.84□□□□□ -0.19
CDH1-204ENST00000562118 CXorf51AA0A1B0GTR3 108 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 RCCD1A6NED2 376 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 K7ESF4 209 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 MYO1FO00160 1098 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 TIMM44O43615 452 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 ADAM23O75077 832 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 RNF8O76064 485 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 CNTN5O94779 1100 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 LRIG2O94898 1065 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 PABPC1P11940 636 aaKnown RBP13.83□□□□□ -0.2
CDH1-204ENST00000562118 TCF4P15884 667 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 DESP17661 470 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 CD70P32970 193 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 GGCXP38435 758 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 ZNF135P52742 658 aaPredicted RBP13.83□□□□□ -0.2
CDH1-204ENST00000562118 OXCT1P55809 520 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 DMC1Q14565 340 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 FUT11Q495W5 492 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 ERMARDQ5T6L9 678 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 ZNF783Q6ZMS7 281 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 SYT13Q7L8C5 426 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 KDM1BQ8NB78 822 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 CCDC112Q8NEF3 446 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 OR52K2Q8NGK3 314 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 TSC1Q92574 1164 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 MYO19Q96H55 970 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 BTBD6Q96KE9 485 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 CALR3Q96L12 384 aaKnown RBP13.83□□□□□ -0.2
CDH1-204ENST00000562118 RPRD1AQ96P16 312 aaPredicted RBP13.83□□□□□ -0.2
CDH1-204ENST00000562118 PRRX2Q99811 253 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 SNRNP25Q9BV90 132 aaKnown RBP13.83□□□□□ -0.2
CDH1-204ENST00000562118 MAGEB5Q9BZ81 275 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 ZYG11BQ9C0D3 744 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 ABCB8Q9NUT2 735 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 TMEM248Q9NWD8 314 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 C2orf42Q9NWW7 574 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 THAP10Q9P2Z0 257 aaPredicted RBP13.83□□□□□ -0.2
CDH1-204ENST00000562118 GGA2Q9UJY4 613 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 FBXO4Q9UKT5 387 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 MMP17Q9ULZ9 603 aa13.83□□□□□ -0.2
CDH1-204ENST00000562118 ARIH1Q9Y4X5 557 aaPredicted RBP13.83□□□□□ -0.2
CDH1-204ENST00000562118 TBC1D3BA6NDS4 549 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 GOLGA6L6A8MZA4 724 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 ATG13O75143 517 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 RHOQP17081 205 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 MAGEA1P43355 309 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 HCAR3P49019 387 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 CCR3P51677 355 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 ARSEP51690 589 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 CA9Q16790 459 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 PTPRNQ16849 979 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 PLEKHG6Q3KR16 790 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 ZNF528Q3MIS6 628 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 BOLA3Q53S33 107 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 EFHC2Q5JST6 749 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 DAB2IPQ5VWQ8 1189 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 LRRC31Q6UY01 552 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 NUDT18Q6ZVK8 323 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 POLNQ7Z5Q5 900 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 CIR1Q86X95 450 aaPredicted RBP13.82□□□□□ -0.2
CDH1-204ENST00000562118 C1orf210Q8IVY1 113 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 PYROXD2Q8N2H3 581 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 RPLP0P6Q8NHW5 317 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 ACDQ96AP0 544 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 SIK2Q9H0K1 926 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 ELOVL2Q9NXB9 296 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 KIAA1522Q9P206 1035 aaPredicted RBP13.82□□□□□ -0.2
CDH1-204ENST00000562118 CTTNBP2NLQ9P2B4 639 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 SALL4Q9UJQ4 1053 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 AP4E1Q9UPM8 1137 aa13.82□□□□□ -0.2
CDH1-204ENST00000562118 STK25O00506 426 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 MAPKAPK2P49137 400 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 VAV2P52735 878 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 CCZ1BP86790 482 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
CDH1-204ENST00000562118 TCF15Q12870 199 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 CDH18Q13634 790 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 E2F5Q15329 346 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 SPA17Q15506 151 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 PITRM1Q5JRX3 1037 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 EGFLAMQ63HQ2 1017 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 TXNRD3NBQ6F5E7 133 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 C11orf63Q6NUN7 778 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 ZNF662Q6ZS27 426 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 TRMT11Q7Z4G4 463 aaKnown RBP13.81□□□□□ -0.2
CDH1-204ENST00000562118 VSIG1Q86XK7 387 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 CPNE8Q86YQ8 564 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 LRRC8AQ8IWT6 810 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 PRSS33Q8NF86 280 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 TBC1D31Q96DN5 1066 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 MRGPRX3Q96LB0 322 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 KCTD15Q96SI1 283 aaPredicted RBP13.81□□□□□ -0.2
CDH1-204ENST00000562118 TMEM245Q9H330 911 aa13.81□□□□□ -0.2
CDH1-204ENST00000562118 LUC7LQ9NQ29 371 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms