RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 RAP1GAP2Q684P5 730 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 SLC9A4Q6AI14 798 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 MAATS1Q7Z4T9 603 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 DTX2Q86UW9 622 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 CAND1Q86VP6 1230 aaKnown RBP4.52□□□□□ -1.69
LRRC28-222ENST00000561431 KRT73Q86Y46 540 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 GATAD2AQ86YP4 633 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 RAB11FIP4Q86YS3 637 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 RASGRP3Q8IV61 690 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 LNX2Q8N448 690 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 NKAPQ8N5F7 415 aaKnown RBP4.52□□□□□ -1.69
LRRC28-222ENST00000561431 SPATA5Q8NB90 893 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 CYP2W1Q8TAV3 490 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 TFAP2BQ92481 460 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 RUBCNQ92622 972 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 ALG8Q9BVK2 526 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 EPS8L2Q9H6S3 715 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 RASSF1Q9NS23 344 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 KLC4Q9NSK0 619 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 EHD3Q9NZN3 535 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 CAPN11Q9UMQ6 739 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 ATP10DQ9P241 1426 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 ARFGEF2Q9Y6D5 1785 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 CHD4Q14839 1912 aa4.52□□□□□ -1.69
LRRC28-222ENST00000561431 ITIH6Q6UXX5 1313 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 A0A087WZ62 844 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 AQP12BA6NM10 295 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 LGALS16A8MUM7 142 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 LMNAP02545 664 aaKnown RBP4.51□□□□□ -1.69
LRRC28-222ENST00000561431 SERPINB2P05120 415 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 TPM2P07951 284 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 ZNF853P0CG23 659 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 CD19P15391 556 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 PECAM1P16284 738 aaPredicted RBP4.51□□□□□ -1.69
LRRC28-222ENST00000561431 ZFXP17010 805 aaPredicted RBP4.51□□□□□ -1.69
LRRC28-222ENST00000561431 NDUFB7P17568 137 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 RBL1P28749 1068 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 CHRNA5P30532 468 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 MCM7P33993 719 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 FOLR3P41439 243 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 ZNF132P52740 706 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 ALDH18A1P54886 795 aaKnown RBP4.51□□□□□ -1.69
LRRC28-222ENST00000561431 ROR1Q01973 937 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 NSUN2Q08J23 767 aaKnown RBP eCLIP4.51□□□□□ -1.69
LRRC28-222ENST00000561431 ZKSCAN8Q15776 578 aaPredicted RBP4.51□□□□□ -1.69
LRRC28-222ENST00000561431 KRT24Q2M2I5 525 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 SLC5A9Q2M3M2 681 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 KIAA1614Q5VZ46 1190 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 Q6ZNX1 250 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 CCDC73Q6ZRK6 1079 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 MAVSQ7Z434 540 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 FAM109AQ8N4B1 249 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 TEX9Q8N6V9 391 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 APPL2Q8NEU8 664 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 NELL1Q92832 810 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 FAM227BQ96M60 508 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 RMDN3Q96TC7 470 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 EIF3CQ99613 913 aaKnown RBP4.51□□□□□ -1.69
LRRC28-222ENST00000561431 FAM167BQ9BTA0 163 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 MYLK2Q9H1R3 596 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 BABAM1Q9NWV8 329 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 DACT1Q9NYF0 836 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 DKK2Q9UBU2 259 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 NKX1-2Q9UD57 310 aaPredicted RBP4.51□□□□□ -1.69
LRRC28-222ENST00000561431 TSPYL4Q9UJ04 414 aa4.51□□□□□ -1.69
LRRC28-222ENST00000561431 DRG1Q9Y295 367 aaKnown RBP4.51□□□□□ -1.69
LRRC28-222ENST00000561431 ANKRD36CQ5JPF3 1778 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 ADGRA2Q96PE1 1338 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 RIC1Q4ADV7 1423 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 A0A087X1B8 175 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 C19orf81C9J6K1 198 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 QSOX1O00391 747 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 TTLL1O95922 423 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 ONECUT2O95948 504 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 PDIA3P30101 505 aaKnown RBP4.5□□□□□ -1.69
LRRC28-222ENST00000561431 ATXN1P54253 815 aaKnown RBP4.5□□□□□ -1.69
LRRC28-222ENST00000561431 INHBCP55103 352 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 TPTEP56180 551 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 KRT83P78385 493 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 IRX3P78415 501 aaPredicted RBP4.5□□□□□ -1.69
LRRC28-222ENST00000561431 MPP3Q13368 585 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 BMPR2Q13873 1038 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 HLFQ16534 295 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 PROSER3Q2NL68 480 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 SLC10A5Q5PT55 438 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 TMTC4Q5T4D3 741 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 PRR5LQ6MZQ0 368 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 C1orf122Q6ZSJ8 110 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 KIAA0408Q6ZU52 694 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 RHOUQ7L0Q8 258 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 RSRC2Q7L4I2 434 aaKnown RBP4.5□□□□□ -1.69
LRRC28-222ENST00000561431 VRK3Q8IV63 474 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 P3H2Q8IVL5 708 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 CCDC117Q8IWD4 279 aaPredicted RBP4.5□□□□□ -1.69
LRRC28-222ENST00000561431 ACTRT2Q8TDY3 377 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 STYXQ8WUJ0 223 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 FUBP1Q96AE4 644 aaKnown RBP4.5□□□□□ -1.69
LRRC28-222ENST00000561431 VPS50Q96JG6 964 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 PPM1MQ96MI6 270 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 IWS1Q96ST2 819 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms