RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 N4BP2L1Q5TBK1 243 aaPredicted RBP17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 DCAF12L1Q5VU92 463 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 FBXL22Q6P050 247 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 RABEPKQ7Z6M1 372 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 ZDHHC17Q8IUH5 632 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 DHX40Q8IX18 779 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 ZCCHC9Q8N567 271 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 NPY6RQ99463 290 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 STK33Q9BYT3 514 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 FBRSQ9HAH7 460 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 NLRC4Q9NPP4 1024 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 PIGVQ9NUD9 493 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 ANO10Q9NW15 660 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 KIAA1522Q9P206 1035 aaPredicted RBP17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 VANGL2Q9ULK5 521 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 ERVW-1Q9UQF0 538 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 PTPRBP23467 1997 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 TDRD6O60522 2096 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 ANKRD36A6QL64 1941 aa17.76■□□□□ 0.43
CDC42BPB-208ENST00000561271 GOLGA8SH3BPF8 625 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 SIN3BO75182 1162 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 PAGE1O75459 146 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 MOCS3O95396 460 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 LSM8O95777 96 aaKnown RBP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 STK19P49842 368 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 COPB1P53618 953 aaKnown RBP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 ATXN3P54252 364 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 NOMO3P69849 1222 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 MYL5Q02045 173 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 HNRNPA1L2Q32P51 320 aaKnown RBP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 FKBP15Q5T1M5 1219 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 SH3PXD2AQ5TCZ1 1133 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 TTC39BQ5VTQ0 682 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 NAA35Q5VZE5 725 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 ZNF776Q68DI1 518 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 ERICH1Q86X53 443 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 XYLT1Q86Y38 959 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 IGSF8Q969P0 613 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 C18orf8Q96DM3 657 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 RPRD1AQ96P16 312 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 NUP58Q9BVL2 599 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 MIR1-1HGQ9H1L0 117 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 SUSD2Q9UGT4 822 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 NOCTQ9UK39 431 aaKnown RBP17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 STAP1Q9ULZ2 295 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 SIK3Q9Y2K2 1263 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 HS3ST4Q9Y661 456 aa17.75■□□□□ 0.43
CDC42BPB-208ENST00000561271 TTC34A8MYJ7 566 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 MBD3O95983 291 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 DNTTP04053 509 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 MZF1P28698 734 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 ACSL1P33121 698 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 GABRB2P47870 512 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 JAM2P57087 298 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 AUHQ13825 339 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 SYCP1Q15431 976 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 TTC31Q49AM3 519 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 CCDC183Q5T5S1 534 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 RNF219Q5W0B1 726 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 CXorf57Q6NSI4 855 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 TRNP1Q6NT89 227 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 MINDY1Q8N5J2 469 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 CADM4Q8NFZ8 388 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 CPA5Q8WXQ8 436 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 SNX19Q92543 992 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 RPL10LQ96L21 214 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 TBCBQ99426 244 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 SIK2Q9H0K1 926 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 RSPH9Q9H1X1 276 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 C6orf106Q9H6K1 298 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 ANLNQ9NQW6 1124 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 SUN2Q9UH99 717 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 TRPM6Q9BX84 2022 aa17.74■□□□□ 0.43
CDC42BPB-208ENST00000561271 ITIH6Q6UXX5 1313 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 LGALS16A8MUM7 142 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 METTL12A8MUP2 240 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 I6L893 689 aaPredicted RBP17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 ARHGAP33O14559 1287 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 ADCY5O95622 1261 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 SRPRAP08240 638 aaKnown RBP17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 C7P10643 843 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 GNSP15586 552 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 SOX5P35711 763 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 FLT3P36888 993 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 SCNN1AP37088 669 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 ECT2LQ008S8 904 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 ZNF252P-AS1Q0IIN9 211 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 C14orf80Q86SX3 495 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 MSANTD4Q8NCY6 345 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 DEFB124Q8NES8 71 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 OR52K2Q8NGK3 314 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 DNASE2BQ8WZ79 361 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 TKTL2Q9H0I9 626 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 RRN3Q9NYV6 651 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 EIF2B4Q9UI10 523 aaKnown RBP17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 SLCO3A1Q9UIG8 710 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 SNX10Q9Y5X0 201 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 SLCO1B1Q9Y6L6 691 aa17.73■□□□□ 0.43
CDC42BPB-208ENST00000561271 USP24Q9UPU5 2620 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms