RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 SPECC1LQ69YQ0 1117 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 NCEH1Q6PIU2 408 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 Q6ZNB5 142 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 WFIKKN2Q8TEU8 576 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 CYB5D2Q8WUJ1 264 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 SNRNP27Q8WVK2 155 aaKnown RBP9.68□□□□□ -0.86
SMAD3-215ENST00000560424 JAKMIP2Q96AA8 810 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 IQCDQ96DY2 449 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 VCPIP1Q96JH7 1222 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 SERAC1Q96JX3 654 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 OMDQ99983 421 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 TUBGCP2Q9BSJ2 902 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 POLR1BQ9H9Y6 1135 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 METTL14Q9HCE5 456 aaKnown RBP9.68□□□□□ -0.86
SMAD3-215ENST00000560424 KIAA1586Q9HCI6 787 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 EVA1BQ9NVM1 165 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 FBXL12Q9NXK8 326 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 ANKMY1Q9P2S6 941 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 SUN2Q9UH99 717 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 NME7Q9Y5B8 376 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 PTPN13Q12923 2485 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 PLXNA2O75051 1894 aa9.68□□□□□ -0.86
SMAD3-215ENST00000560424 A0A1W2PQH9 124 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 K7ENP7 123 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 TLR4O00206 839 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 DXOO77932 396 aaKnown RBP9.67□□□□□ -0.86
SMAD3-215ENST00000560424 CST3P01034 146 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-215ENST00000560424 WNT1P04628 370 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 ATP5BP06576 529 aaKnown RBP9.67□□□□□ -0.86
SMAD3-215ENST00000560424 TPM2P07951 284 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 FAM200BP0CF97 657 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 NR2F2P24468 414 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 ATICP31939 592 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 LSSP48449 732 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 PGFP49763 221 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 PSEN1P49768 467 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 ST8SIA6P61647 398 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 TBX2Q13207 712 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-215ENST00000560424 ADAM9Q13443 819 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 TRIM14Q14142 442 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 SHBQ15464 509 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 MAN2A1Q16706 1144 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 FIGNQ5HY92 759 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 MIIPQ5JXC2 388 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 INO80CQ6PI98 192 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-215ENST00000560424 SCARA5Q6ZMJ2 495 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 USP30Q70CQ3 517 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 CBWD2Q8IUF1 395 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 DENND1CQ8IV53 801 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 NELFCDQ8IXH7 590 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 RDH13Q8NBN7 331 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 OR2T34Q8NGX1 318 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 SLC2A14Q8TDB8 520 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 ERGIC2Q96RQ1 377 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 PRSS16Q9NQE7 514 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 AGPAT3Q9NRZ7 376 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMAD3-215ENST00000560424 STRIP2Q9ULQ0 834 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 TPX2Q9ULW0 747 aaKnown RBP9.67□□□□□ -0.86
SMAD3-215ENST00000560424 SCML2Q9UQR0 700 aa9.67□□□□□ -0.86
SMAD3-215ENST00000560424 A0A1W2PP55 124 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 SDC3O75056 442 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 CSO75390 466 aaKnown RBP9.66□□□□□ -0.86
SMAD3-215ENST00000560424 RNASEH2AO75792 299 aaKnown RBP9.66□□□□□ -0.86
SMAD3-215ENST00000560424 NR3C1P04150 777 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 GP1BBP13224 206 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 P4HA1P13674 534 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 CCDC130P13994 396 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 POLR2EP19388 210 aaKnown RBP9.66□□□□□ -0.86
SMAD3-215ENST00000560424 RXRGP48443 463 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 GALCP54803 685 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 NXPH1P58417 271 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 EFEMP1Q12805 493 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 BIRC3Q13489 604 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 ZNF699Q32M78 642 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 MPPE1Q53F39 396 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 ZNF667Q5HYK9 610 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 C3orf38Q5JPI3 329 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 SFMBT2Q5VUG0 894 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 PAQR9Q6ZVX9 377 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 CHST9Q7L1S5 443 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 RSRC2Q7L4I2 434 aaKnown RBP9.66□□□□□ -0.86
SMAD3-215ENST00000560424 ACOT1Q86TX2 421 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 FUKQ8N0W3 1084 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 AHI1Q8N157 1196 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 CCDC150Q8NCX0 1101 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 CCDC127Q96BQ5 260 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 CGRRF1Q99675 332 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 SMOQ99835 787 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 ORAI3Q9BRQ5 295 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 TMEM245Q9H330 911 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 PABPC3Q9H361 631 aaKnown RBP9.66□□□□□ -0.86
SMAD3-215ENST00000560424 SMYD3Q9H7B4 428 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 ERVMER34-1Q9H9K5 563 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 OSER1Q9NX31 292 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 HSPBP1Q9NZL4 362 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 PIEZO2Q9H5I5 2752 aa9.66□□□□□ -0.86
SMAD3-215ENST00000560424 TERTO14746 1132 aaKnown RBP9.65□□□□□ -0.86
SMAD3-215ENST00000560424 TEX33O43247 280 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms