RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FAM105AQ9NUU6 356 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 TM9SF1O15321 606 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 MAFO75444 373 aaPredicted RBP13.72□□□□□ -0.21
TRAF3-208ENST00000560371 PYGMP11217 842 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 DCLRE1AQ6PJP8 1040 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 SLC2A4P14672 509 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
TRAF3-208ENST00000560371 CXorf40AQ8TE69 158 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 HSFY1Q96LI6 401 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 KCNMB3Q9NPA1 279 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 SLC27A5Q9Y2P5 690 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 PHLPP1O60346 1717 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 KANSL1LA0AUZ9 987 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 GLTPD2A6NH11 291 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 SEC24CP53992 1094 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 FAM110CQ1W6H9 321 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 ALFQ53S48 1182 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 WDR59Q6PJI9 974 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 BBS4Q96RK4 519 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 ATP13A3Q9H7F0 1226 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 PALMDQ9NP74 551 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 AVENQ9NQS1 362 aaPredicted RBP13.72□□□□□ -0.21
TRAF3-208ENST00000560371 GTF2A1LQ9UNN4 478 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 ABCB1P08183 1280 aaPredicted RBP13.72□□□□□ -0.21
TRAF3-208ENST00000560371 ELNP15502 786 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 TYMPP19971 482 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
TRAF3-208ENST00000560371 ELK3P41970 407 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 SERPINH1P50454 418 aaKnown RBP13.72□□□□□ -0.21
TRAF3-208ENST00000560371 TCEA2Q15560 299 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 SLC45A4Q5BKX6 768 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 ZC3H12AQ5D1E8 599 aaKnown RBP13.72□□□□□ -0.21
TRAF3-208ENST00000560371 UNKQ9C0B0 810 aaKnown RBP13.72□□□□□ -0.21
TRAF3-208ENST00000560371 CATSPERZQ9NTU4 200 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 C1QTNF3-AMACRE9PGA6 284 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 KIF2BQ8N4N8 673 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 MIR1-1HGQ9H1L0 117 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 A0A088AWK7 358 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 WDR27A2RRH5 827 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 SIGLEC16A6NMB1 481 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 ZNF682O95780 498 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 TRUB2O95900 331 aaKnown RBP13.71□□□□□ -0.21
TRAF3-208ENST00000560371 ZNF10P21506 573 aaPredicted RBP13.71□□□□□ -0.21
TRAF3-208ENST00000560371 TBL3Q12788 808 aaKnown RBP13.71□□□□□ -0.21
TRAF3-208ENST00000560371 CCDC142Q17RM4 750 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 POM121L1PQ3SYA9 428 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 CCDC153Q494R4 210 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 RAP1GAP2Q684P5 730 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 MAGEB18Q96M61 343 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 GNRH1P01148 92 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 AMD1P17707 334 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 RPS7P62081 194 aaKnown RBP13.71□□□□□ -0.21
TRAF3-208ENST00000560371 PDPK2PQ6A1A2 396 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 MFSD7Q6UXD7 560 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 MTMR9Q96QG7 549 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 NMRAL1Q9HBL8 299 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 BLOC1S4Q9NUP1 217 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 CYP3A7-CYP3A51PA0A087WV96 503 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 BAIAP3O94812 1187 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 CYP3A7P24462 503 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 AGKQ53H12 422 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 TM6SF2Q9BZW4 377 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 DNAJC16Q9Y2G8 782 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 C2CD2Q9Y426 696 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 UBIAD1Q9Y5Z9 338 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 IRAK1P51617 712 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 MLPHQ9BV36 600 aaPredicted RBP13.71□□□□□ -0.21
TRAF3-208ENST00000560371 IL22Q9GZX6 179 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 SLC28A3Q9HAS3 691 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 IFT172Q9UG01 1749 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 CCDC88AQ3V6T2 1871 aa13.71□□□□□ -0.21
TRAF3-208ENST00000560371 TISP43B9A030 160 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 DAB2IPQ5VWQ8 1189 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.22
TRAF3-208ENST00000560371 FNDC5Q8NAU1 212 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 REPS1Q96D71 796 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 F8VP50 259 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 NBNO60934 754 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 SKIV2L2P42285 1042 aaKnown RBP13.71□□□□□ -0.22
TRAF3-208ENST00000560371 NEK2P51955 445 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 KLC1Q07866 573 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 GRIK3Q13003 919 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 CES3Q6UWW8 571 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 KCNK18Q7Z418 384 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 METTL6Q8TCB7 284 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 ZYG11BQ9C0D3 744 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 TLE6Q9H808 572 aa13.71□□□□□ -0.22
TRAF3-208ENST00000560371 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF862O60290 1169 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 TBL1XO60907 577 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 NUDT14O95848 222 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 GTF2BQ00403 316 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 MAD2L1Q13257 205 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-208ENST00000560371 PTF1AQ7RTS3 328 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 GPSM1Q86YR5 675 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CPNE1Q99829 537 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CDT1Q9H211 546 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms