RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 ZNF510Q9Y2H8 683 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.67□□□□□ -0.86
HERC1-206ENST00000559996 SH3BP1Q9Y3L3 701 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 WNT6Q9Y6F9 365 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 MYO10Q9HD67 2058 aa9.67□□□□□ -0.86
HERC1-206ENST00000559996 CHD5Q8TDI0 1954 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 COL6A3P12111 3177 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 LOC730098B7Z3J9 87 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 EEF2KO00418 725 aaKnown RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 CEP104O60308 925 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 TSPAN3O60637 253 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 PENKP01210 267 aaPredicted RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 HTR7P34969 479 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 SLC11A2P49281 568 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 ZNF135P52742 658 aaPredicted RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 MTA1Q13330 715 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 PAFAH1B3Q15102 231 aaKnown RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 FSCBQ5H9T9 825 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 ACBD5Q5T8D3 534 aaPredicted RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 PTCRAQ6ISU1 281 aaPredicted RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 NPNTQ6UXI9 565 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 BBS12Q6ZW61 710 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 OTOP3Q7RTS5 596 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 ZNF572Q7Z3I7 529 aaPredicted RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 CIR1Q86X95 450 aaPredicted RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 MAP7D3Q8IWC1 876 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 ARHGAP12Q8IWW6 846 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 NPWQ8N729 165 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 NETO2Q8NC67 525 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 KIF18AQ8NI77 898 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 ZNF592Q92610 1267 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 TMA16Q96EY4 203 aaKnown RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 ALG14Q96F25 216 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 RBM41Q96IZ5 413 aaKnown RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 ZFYVE19Q96K21 471 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 KXD1Q9BQD3 176 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 CALN1Q9BXU9 219 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 L2HGDHQ9H9P8 463 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 TMEM248Q9NWD8 314 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 TBC1D14Q9P2M4 693 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 SAE1Q9UBE0 346 aaPredicted RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 CDC23Q9UJX2 597 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 R3HDM2Q9Y2K5 976 aaKnown RBP9.66□□□□□ -0.86
HERC1-206ENST00000559996 MRFAP1Q9Y605 127 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 NUMBLQ9Y6R0 609 aa9.66□□□□□ -0.86
HERC1-206ENST00000559996 SHISA7A6NL88 538 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 CST8O60676 142 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 FGGP02679 453 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 CISD3P0C7P0 127 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 ARSAP15289 507 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 PECAM1P16284 738 aaPredicted RBP9.65□□□□□ -0.86
HERC1-206ENST00000559996 RHOQP17081 205 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 SP100P23497 879 aaPredicted RBP9.65□□□□□ -0.86
HERC1-206ENST00000559996 HOXD9P28356 352 aaPredicted RBP9.65□□□□□ -0.86
HERC1-206ENST00000559996 EPHB2P29323 1055 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 CHKAP35790 457 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 GBE1Q04446 702 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 TNK2Q07912 1038 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 KRT81Q14533 505 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 DHCR24Q15392 516 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 LY6G5CQ5SRR4 150 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 MPP7Q5T2T1 576 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 KAZNQ674X7 775 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 CXorf57Q6NSI4 855 aaKnown RBP9.65□□□□□ -0.86
HERC1-206ENST00000559996 TPGS1Q6ZTW0 290 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 KIAA0907Q7Z7F0 614 aaPredicted RBP9.65□□□□□ -0.86
HERC1-206ENST00000559996 CHSY1Q86X52 802 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 SLC44A3Q8N4M1 653 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 PRELID2Q8N945 189 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 TDRD5Q8NAT2 981 aaKnown RBP9.65□□□□□ -0.86
HERC1-206ENST00000559996 IRF7Q92985 503 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 E2F7Q96AV8 911 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 OTUB2Q96DC9 234 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 TBC1D31Q96DN5 1066 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 EPAS1Q99814 870 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 ZYG11BQ9C0D3 744 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 SLC39A8Q9C0K1 460 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 LRRC19Q9H756 370 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 SPHK2Q9NRA0 654 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 DUS2Q9NX74 493 aaKnown RBP9.65□□□□□ -0.86
HERC1-206ENST00000559996 DTLQ9NZJ0 730 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 MARK1Q9P0L2 795 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 LIMD1Q9UGP4 676 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 LSM7Q9UK45 103 aaKnown RBP9.65□□□□□ -0.86
HERC1-206ENST00000559996 TBC1D30Q9Y2I9 924 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 OR51B4Q9Y5P0 310 aa9.65□□□□□ -0.86
HERC1-206ENST00000559996 F5H5T6 163 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 H3BRJ5 948 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 TRIM24O15164 1050 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 CHADO15335 359 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 TBL1XO60907 577 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 URI1O94763 535 aaPredicted RBP9.64□□□□□ -0.87
HERC1-206ENST00000559996 CYP17A1P05093 508 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 PSMC3P17980 439 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 ARL4AP40617 200 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 CDH4P55283 916 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 TPI1P60174 286 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 MESP2Q0VG99 397 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 GRM2Q14416 872 aa9.64□□□□□ -0.87
HERC1-206ENST00000559996 CYP1B1Q16678 543 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms