RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 MAPRE1Q15691 268 aaKnown RBP9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 C14orf28Q4W4Y0 310 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 BMP2KLQ5H9B9 411 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 TTC38Q5R3I4 469 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 PRIMA1Q86XR5 153 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 NUP93Q8N1F7 819 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 MYCT1Q8N699 235 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 LRRN4CLQ8ND94 238 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 MYCBPAPQ8TBZ2 947 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 KLHDC7BQ96G42 594 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 KCNK16Q96T55 309 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 MFRPQ9BY79 579 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 FOXP3Q9BZS1 431 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 ZHX3Q9H4I2 956 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 PDRG1Q9NUG6 133 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 MAP10Q9P2G4 905 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 LSM7Q9UK45 103 aaKnown RBP9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 DAAM1Q9Y4D1 1078 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 FAM221AA4D161 298 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 NTN3O00634 580 aaPredicted RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 MUSKO15146 869 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 MDM4O15151 490 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 DUX1O43812 170 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 TLR5O60602 858 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 PFKFB2O60825 505 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 IL18RAPO95256 599 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 FECHP22830 423 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 ITGB7P26010 798 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 CDC20Q12834 499 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 DRAP1Q14919 205 aaPredicted RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 ZRSR2Q15696 482 aaKnown RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 SKOR2Q2VWA4 1001 aaPredicted RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 FNDC3BQ53EP0 1204 aaKnown RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 TMEM164Q5U3C3 297 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 ZNF776Q68DI1 518 aaPredicted RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 LRRC52Q8N7C0 313 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 NECAB1Q8N987 351 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 SYT2Q8N9I0 419 aaPredicted RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 ZSWIM2Q8NEG5 633 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 NOC3LQ8WTT2 800 aaKnown RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 POMGNT1Q8WZA1 660 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 SLC45A3Q96JT2 553 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 FAM213AQ9BRX8 229 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 MMTAG2Q9BU76 263 aaKnown RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 KLF16Q9BXK1 252 aaPredicted RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 CDH19Q9H159 772 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 NEUROG2Q9H2A3 272 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 PABPC3Q9H361 631 aaKnown RBP9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 PRSS16Q9NQE7 514 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 RRN3Q9NYV6 651 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 SIX4Q9UIU6 781 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 CLEC4EQ9ULY5 219 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 SCML1Q9UN30 329 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 NME7Q9Y5B8 376 aa9.75□□□□□ -0.85
PPP1R3E-204ENST00000559942 C10orf142B7Z368 130 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 AGRPO00253 132 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 GRID2O43424 1007 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 TIMM44O43615 452 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 FAM13AO94988 1023 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 RTN3O95197 1032 aaPredicted RBP9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 SNRPB2P08579 225 aaKnown RBP9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 BPIP17213 487 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 ETV5P41161 510 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 SLC12A3P55017 1021 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 RBP5P82980 135 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 KCNMA1Q12791 1236 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 EIF4HQ15056 248 aaKnown RBP9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 NR0B2Q15466 257 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 ARSHQ5FYA8 562 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 TMEM215Q68D42 235 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 ANKS1BQ7Z6G8 1248 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 PRPF39Q86UA1 669 aaKnown RBP9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 NT5DC4Q86YG4 428 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 C4orf32Q8N8J7 132 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 CXorf38Q8TB03 319 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 FAM174AQ8TBP5 190 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 CYB5D2Q8WUJ1 264 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 CACTINQ8WUQ7 758 aaKnown RBP9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 OVCA2Q8WZ82 227 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 SAAL1Q96ER3 474 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 IPO9Q96P70 1041 aaKnown RBP9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 CCDC3Q9BQI4 270 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 MRPL45Q9BRJ2 306 aaKnown RBP9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 REEP2Q9BRK0 252 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 RAB34Q9BZG1 259 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 MTMR12Q9C0I1 747 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 DPEP3Q9H4B8 488 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 CAAP1Q9H8G2 361 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 SERGEFQ9UGK8 458 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 NUDT5Q9UKK9 219 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 ITGA11Q9UKX5 1188 aa9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 R3HCC1Q9Y3T6 440 aaKnown RBP9.74□□□□□ -0.85
PPP1R3E-204ENST00000559942 A0A1W2PP55 124 aa9.73□□□□□ -0.85
PPP1R3E-204ENST00000559942 SLC12A8A0AV02 714 aa9.73□□□□□ -0.85
PPP1R3E-204ENST00000559942 LATO43561 262 aa9.73□□□□□ -0.85
PPP1R3E-204ENST00000559942 EIF5BO60841 1220 aaKnown RBP9.73□□□□□ -0.85
PPP1R3E-204ENST00000559942 SORBS2O94875 1100 aaKnown RBP9.73□□□□□ -0.85
PPP1R3E-204ENST00000559942 CBX6O95503 412 aa9.73□□□□□ -0.85
PPP1R3E-204ENST00000559942 PLA2G4BP0C869 781 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms