RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 CD59P13987 128 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 HOXB3P14651 431 aaPredicted RBP6.11□□□□□ -1.43
USP3-212ENST00000559276 HOXB2P14652 356 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 TYRP14679 529 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 EIF4A3P38919 411 aaKnown RBP6.11□□□□□ -1.43
USP3-212ENST00000559276 MAPK8P45983 427 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 PMS1P54277 932 aaKnown RBP6.11□□□□□ -1.43
USP3-212ENST00000559276 MAP3K7CLP57077 242 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 PPP3CAQ08209 521 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 INCA1Q0VD86 236 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 ANO4Q32M45 955 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 UAP1L1Q3KQV9 507 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 PREPLQ4J6C6 727 aaPredicted RBP6.11□□□□□ -1.43
USP3-212ENST00000559276 LACTB2Q53H82 288 aaPredicted RBP6.11□□□□□ -1.43
USP3-212ENST00000559276 KLHDC7AQ5VTJ3 777 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 DAB2IPQ5VWQ8 1189 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 LYSMD4Q5XG99 296 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 ANKRD40Q6AI12 368 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 C6orf89Q6UWU4 347 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 NLRP14Q86W24 1093 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 ACTRT1Q8TDG2 376 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 TMC2Q8TDI7 906 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 ZNF473Q8WTR7 871 aaKnown RBP6.11□□□□□ -1.43
USP3-212ENST00000559276 BAP1Q92560 729 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 TAF4BQ92750 862 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 CENPTQ96BT3 561 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 ERLEC1Q96DZ1 483 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 TNIP3Q96KP6 325 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 MRGPRX1Q96LB2 322 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 ZIM3Q96PE6 472 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 HNRNPABQ99729 332 aaKnown RBP6.11□□□□□ -1.43
USP3-212ENST00000559276 MED10Q9BTT4 135 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 ADAM33Q9BZ11 813 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 FAM129AQ9BZQ8 928 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 ISCUQ9H1K1 167 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 CXorf56Q9H5V9 222 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP3-212ENST00000559276 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP3-212ENST00000559276 DONSONQ9NYP3 566 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 BCCIPQ9P287 314 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP3-212ENST00000559276 DEC1Q9P2X7 70 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 DMGDHQ9UI17 866 aaKnown RBP6.11□□□□□ -1.43
USP3-212ENST00000559276 TMEM59LQ9UK28 342 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 NUDT5Q9UKK9 219 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 KLK13Q9UKR3 277 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 INTUQ9ULD6 942 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 CLEC4EQ9ULY5 219 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 SCML2Q9UQR0 700 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 SH3BP1Q9Y3L3 701 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 RAD54BQ9Y620 910 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 CAPN7Q9Y6W3 813 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 PCNX2A6NKB5 2137 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 PLXNB3Q9ULL4 1909 aa6.11□□□□□ -1.43
USP3-212ENST00000559276 CELSR3Q9NYQ7 3312 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 LOC400499M0QZD8 3231 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 CKAP5Q14008 2032 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 A0A0A6YYK5 440 aaPredicted RBP6.1□□□□□ -1.43
USP3-212ENST00000559276 A0A1W2PQH9 124 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 FAM221BA6H8Z2 402 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 GMNCA6NCL1 334 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 NEDD8-MDP1E9PL57 170 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 TAF4O00268 1085 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 PDXKO00764 312 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 MAP3K13O43283 966 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 HYAL3O43820 417 aaPredicted RBP6.1□□□□□ -1.43
USP3-212ENST00000559276 CILPO75339 1184 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 RASSF9O75901 435 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 STC2O76061 302 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 MOCS3O95396 460 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 PENKP01210 267 aaPredicted RBP6.1□□□□□ -1.43
USP3-212ENST00000559276 HLA-DRAP01903 254 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 NR3C1P04150 777 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 SERPINF2P08697 491 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 TRIM49P0CI25 452 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 TRIM49CP0CI26 452 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 ACO1P21399 889 aaKnown RBP6.1□□□□□ -1.43
USP3-212ENST00000559276 ADORA2BP29275 332 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 NTSR1P30989 418 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 HOXD12P35452 270 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 AP3M2P53677 418 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 FKBP3Q00688 224 aaKnown RBP6.1□□□□□ -1.43
USP3-212ENST00000559276 BNC1Q01954 994 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 RPL6Q02878 288 aaKnown RBP6.1□□□□□ -1.43
USP3-212ENST00000559276 ZNF33AQ06730 810 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 LMAN2Q12907 356 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 ENPP2Q13822 863 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 SLC18A3Q16572 532 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 SGSM1Q2NKQ1 1148 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 CCDC40Q4G0X9 1142 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 WLSQ5T9L3 541 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 MEI1Q5TIA1 1274 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 SFMBT2Q5VUG0 894 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 FYB2Q5VWT5 728 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 SMYD5Q6GMV2 418 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 GRAMD4Q6IC98 578 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 KLHDC10Q6PID8 442 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 TPGS1Q6ZTW0 290 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 CCDC121Q6ZUS5 278 aa6.1□□□□□ -1.43
USP3-212ENST00000559276 BHLHA9Q7RTU4 235 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms