RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 KRT32Q14532 448 aa12.1□□□□□ -0.47
CASC4-208ENST00000559151 SH2D4BQ5SQS7 431 aa12.1□□□□□ -0.47
CASC4-208ENST00000559151 MZT2BQ6NZ67 158 aa12.1□□□□□ -0.47
CASC4-208ENST00000559151 C4orf50Q6ZRC1 276 aa12.1□□□□□ -0.47
CASC4-208ENST00000559151 R3HCC1LQ7Z5L2 792 aaKnown RBP12.1□□□□□ -0.47
CASC4-208ENST00000559151 RUFY2Q8WXA3 655 aa12.1□□□□□ -0.47
CASC4-208ENST00000559151 ABHD14AQ9BUJ0 271 aa12.1□□□□□ -0.47
CASC4-208ENST00000559151 INTS2Q9H0H0 1204 aaKnown RBP12.1□□□□□ -0.47
CASC4-208ENST00000559151 ALKBH4Q9NXW9 302 aa12.1□□□□□ -0.47
CASC4-208ENST00000559151 SH3BP4Q9P0V3 963 aa12.1□□□□□ -0.47
CASC4-208ENST00000559151 ORC3Q9UBD5 711 aaPredicted RBP12.1□□□□□ -0.47
CASC4-208ENST00000559151 A0A087X0M5 115 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 A0A1B0GX30 115 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 H7C1Q1 480 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 TNPO2O14787 897 aaKnown RBP12.09□□□□□ -0.47
CASC4-208ENST00000559151 DSCR3O14972 297 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 LDHCP07864 332 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 CYP4B1P13584 511 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 RPS6KA3P51812 740 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 DCAF7P61962 342 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 PUM1Q14671 1186 aaKnown RBP eCLIP12.09□□□□□ -0.47
CASC4-208ENST00000559151 KPNB1Q14974 876 aaKnown RBP12.09□□□□□ -0.47
CASC4-208ENST00000559151 UBAP2Q5T6F2 1119 aaKnown RBP12.09□□□□□ -0.47
CASC4-208ENST00000559151 VSTM1Q6UX27 236 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 RNF144BQ7Z419 303 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 ADGRG6Q86SQ4 1221 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 NEU4Q8WWR8 484 aaPredicted RBP12.09□□□□□ -0.47
CASC4-208ENST00000559151 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
CASC4-208ENST00000559151 ATP2A3Q93084 1043 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 CHCHD6Q9BRQ6 235 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 TRIM2Q9C040 744 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 TOR3AQ9H497 397 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 FBXO2Q9UK22 296 aaPredicted RBP12.09□□□□□ -0.47
CASC4-208ENST00000559151 CAMK2AQ9UQM7 478 aa12.09□□□□□ -0.47
CASC4-208ENST00000559151 DDX58O95786 925 aaKnown RBP12.08□□□□□ -0.48
CASC4-208ENST00000559151 PKMP14618 531 aaKnown RBP12.08□□□□□ -0.48
CASC4-208ENST00000559151 KRT4P19013 534 aa12.08□□□□□ -0.48
CASC4-208ENST00000559151 TMEM200AQ86VY9 491 aa12.08□□□□□ -0.48
CASC4-208ENST00000559151 EXD3Q8N9H8 876 aa12.08□□□□□ -0.48
CASC4-208ENST00000559151 ANKRD52Q8NB46 1076 aa12.08□□□□□ -0.48
CASC4-208ENST00000559151 RFWD2Q8NHY2 731 aa12.08□□□□□ -0.48
CASC4-208ENST00000559151 FYTTD1Q96QD9 318 aaKnown RBP12.08□□□□□ -0.48
CASC4-208ENST00000559151 CD180Q99467 661 aa12.08□□□□□ -0.48
CASC4-208ENST00000559151 NUAK2Q9H093 628 aa12.08□□□□□ -0.48
CASC4-208ENST00000559151 NAALADL1Q9UQQ1 740 aa12.08□□□□□ -0.48
CASC4-208ENST00000559151 PKP3Q9Y446 797 aa12.08□□□□□ -0.48
CASC4-208ENST00000559151 INSRRP14616 1297 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 HNF1BP35680 557 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 CCR9P51686 369 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 CAMK1Q14012 370 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 NAA25Q14CX7 972 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 PRICKLE4Q2TBC4 344 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 CC2D1BQ5T0F9 858 aaKnown RBP12.07□□□□□ -0.48
CASC4-208ENST00000559151 HAUS3Q68CZ6 603 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 AMIGO2Q86SJ2 522 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 BRSK2Q8IWQ3 736 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 ADAMTS18Q8TE60 1221 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 C2CD4CQ8TF44 421 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 BARD1Q99728 777 aaKnown RBP12.07□□□□□ -0.48
CASC4-208ENST00000559151 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 SLC25A18Q9H1K4 315 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 CPNE5Q9HCH3 593 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 TBC1D22BQ9NU19 505 aa12.07□□□□□ -0.48
CASC4-208ENST00000559151 BTBD19C9JJ37 291 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 JTBO76095 146 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 IDUAP35475 653 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 ABHD18Q0P651 414 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 BYSLQ13895 437 aaKnown RBP12.06□□□□□ -0.48
CASC4-208ENST00000559151 RTL10Q7L3V2 364 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 MDGA2Q7Z553 956 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 GALNT7Q86SF2 657 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 RFX6Q8HWS3 928 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 CLSTN3Q9BQT9 956 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 ARL8BQ9NVJ2 186 aa12.06□□□□□ -0.48
CASC4-208ENST00000559151 PGPEP1LA6NFU8 196 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 TMEM191CA6NGB0 347 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 F5H0A9 414 aaPredicted RBP12.05□□□□□ -0.48
CASC4-208ENST00000559151 MATN3O15232 486 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 GPD2P43304 727 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 ADPRHP54922 357 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 SEC23BQ15437 767 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 AP5B1Q2VPB7 878 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 GLE1Q53GS7 698 aaKnown RBP12.05□□□□□ -0.48
CASC4-208ENST00000559151 TFAP2DQ7Z6R9 452 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 EYA3Q99504 573 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.05□□□□□ -0.48
CASC4-208ENST00000559151 LMAN2LQ9H0V9 348 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.05□□□□□ -0.48
CASC4-208ENST00000559151 ZDHHC7Q9NXF8 308 aa12.05□□□□□ -0.48
CASC4-208ENST00000559151 SLC25A10Q9UBX3 287 aaPredicted RBP12.05□□□□□ -0.48
CASC4-208ENST00000559151 TSPAN4O14817 238 aa12.04□□□□□ -0.48
CASC4-208ENST00000559151 USO1O60763 962 aaKnown RBP12.04□□□□□ -0.48
CASC4-208ENST00000559151 TMEM63AO94886 807 aa12.04□□□□□ -0.48
CASC4-208ENST00000559151 ENO1P06733 434 aaKnown RBP12.04□□□□□ -0.48
CASC4-208ENST00000559151 TGM2P21980 687 aa12.04□□□□□ -0.48
CASC4-208ENST00000559151 GSTM2P28161 218 aa12.04□□□□□ -0.48
CASC4-208ENST00000559151 CDH15P55291 814 aa12.04□□□□□ -0.48
CASC4-208ENST00000559151 SLC45A4Q5BKX6 768 aa12.04□□□□□ -0.48
CASC4-208ENST00000559151 CRIP3Q6Q6R5 217 aa12.04□□□□□ -0.48
CASC4-208ENST00000559151 DHRS13Q6UX07 377 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms