RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CAPN9O14815 690 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 THAP12O43422 761 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 TBL1XO60907 577 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 GADD45BO75293 160 aaPredicted RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 LETM1O95202 739 aaPredicted RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 ASLP04424 464 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 DLDP09622 509 aaKnown RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 HLA-EP13747 358 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 POLR2EP19388 210 aaKnown RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 GNA15P30679 374 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 RPL34P49207 117 aaKnown RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 SGSHP51688 502 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 COPAP53621 1224 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 ST8SIA6P61647 398 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 UBE2HP62256 183 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 ZBTB16Q05516 673 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 GRIK2Q13002 908 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 SEMA3BQ13214 749 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 SLC14A1Q13336 389 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 CAMK2GQ13555 558 aaPredicted RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 CDH18Q13634 790 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 HNRNPDQ14103 355 aaKnown RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 FAM133BQ5BKY9 247 aaKnown RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 PIK3R6Q5UE93 754 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 TMEM215Q68D42 235 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 MBLAC2Q68D91 279 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 ZNF776Q68DI1 518 aaPredicted RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 RFWD3Q6PCD5 774 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 TRIM65Q6PJ69 517 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 BEND5Q7L4P6 421 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 TMPRSS6Q8IU80 811 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 ZCCHC9Q8N567 271 aaKnown RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 CLEC4CQ8WTT0 213 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 AZIN2Q96A70 460 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 PRICKLE1Q96MT3 831 aaPredicted RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 KREMEN1Q96MU8 473 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 NUP58Q9BVL2 599 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 GPR174Q9BXC1 333 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 SRRTQ9BXP5 876 aaKnown RBP8.36□□□□□ -1.07
TRAF3-205ENST00000558700 FSCN3Q9NQT6 498 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 ITM2CQ9NQX7 267 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 RWDD2AQ9UIY3 292 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 TLR6Q9Y2C9 796 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 CEP295Q9C0D2 2601 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 USP24Q9UPU5 2620 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 GON4LQ3T8J9 2241 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 GTPBP10A4D1E9 387 aaKnown RBP8.35□□□□□ -1.07
TRAF3-205ENST00000558700 E5RJQ4 531 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 MOCS3O95396 460 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 CER1O95813 267 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 MOCS2O96007 188 aaPredicted RBP8.35□□□□□ -1.07
TRAF3-205ENST00000558700 CALCAP01258 141 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 DNTTP04053 509 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 SLC6A4P31645 630 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 CD70P32970 193 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 RDXP35241 583 aaKnown RBP8.35□□□□□ -1.07
TRAF3-205ENST00000558700 GPD2P43304 727 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 EIF1AXP47813 144 aaKnown RBP8.35□□□□□ -1.07
TRAF3-205ENST00000558700 SIM1P81133 766 aaPredicted RBP8.35□□□□□ -1.07
TRAF3-205ENST00000558700 PDCLQ13371 301 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 DCAF12L1Q5VU92 463 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 NADSYN1Q6IA69 706 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 UNQ6494/PRO21346Q6UXR6 183 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 GBP6Q6ZN66 633 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 KIAA0907Q7Z7F0 614 aaPredicted RBP8.35□□□□□ -1.07
TRAF3-205ENST00000558700 PIP4P1Q86T03 277 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 TAC4Q86UU9 113 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 ADIPOR2Q86V24 386 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 CHSY1Q86X52 802 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 WFDC5Q8TCV5 224 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 CYB5D2Q8WUJ1 264 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 DNASE2BQ8WZ79 361 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 SNX19Q92543 992 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 FCRL2Q96LA5 508 aaPredicted RBP8.35□□□□□ -1.07
TRAF3-205ENST00000558700 NOX5Q96PH1 765 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 MED15Q96RN5 788 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 MIR1-1HGQ9H1L0 117 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 TMEM245Q9H330 911 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 ETNK1Q9HBU6 452 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 POPDC2Q9HBU9 364 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 UBE2TQ9NPD8 197 aaPredicted RBP8.35□□□□□ -1.07
TRAF3-205ENST00000558700 TMPRSS4Q9NRS4 437 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 APEX2Q9UBZ4 518 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 TJP2Q9UDY2 1190 aa8.35□□□□□ -1.07
TRAF3-205ENST00000558700 GOLGA6L7A0A1B0GV03 622 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 TMEM8BA6NDV4 472 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 A6NJY4 79 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 METTL12A8MUP2 240 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 KCNJ18B7U540 433 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 H0Y626 953 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 PAPSS1O43252 624 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 RNASEH1O60930 286 aaKnown RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 LUC7L3O95232 432 aaKnown RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 TRIM16O95361 564 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 FYNP06241 537 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 SLC2A3P11169 496 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 ERCC5P28715 1186 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 USP8P40818 1118 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 EPHA4P54764 986 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 PSMA6P60900 246 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms